RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FAAP100Q0VG06 881 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 MAP9Q49MG5 647 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 SPOPLQ6IQ16 392 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 HACE1Q8IYU2 909 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 TRIM58Q8NG06 486 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 RUBCNQ92622 972 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 TRAIPQ9BWF2 469 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 GPR88Q9GZN0 384 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 CLSTN1O94985 981 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 KRT19P08727 400 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ITGA4P13612 1032 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 SOX5P35711 763 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ITIH3Q06033 890 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 SGSM1Q2NKQ1 1148 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 EXOC4Q96A65 974 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 KREMEN1Q96MU8 473 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 MCOLN1Q9GZU1 580 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 VIPAS39Q9H9C1 493 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 APOBEC3GQ9HC16 384 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ABCB6Q9NP58 842 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ARHGAP20Q9P2F6 1191 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 TRIM10Q9UDY6 481 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 SIX4Q9UIU6 781 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ATP11BQ9Y2G3 1177 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ASS1P00966 412 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 ITGB3P05106 788 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 SERPING1P05155 500 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 RAB27AP51159 221 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 VSNL1P62760 191 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 NOP14P78316 857 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 GCNT1Q02742 428 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 XKR4Q5GH76 650 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 IRF2BP2Q7Z5L9 587 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 TMEM130Q8N3G9 435 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 FAM81BQ96LP2 452 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 HIPK3Q9H422 1215 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 RNF19AQ9NV58 838 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 DPP3Q9NY33 737 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 CALCOCO1Q9P1Z2 691 aa20.71■□□□□ 0.91
PDLIM2-204ENST00000397760 A0A0U1RQF3 1178 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 SMIM28A0A1B0GU29 152 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 FOXN3O00409 490 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 GFPT2O94808 682 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 PLEKP08567 350 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 RHOXF2BP0C7M4 288 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 CAPN2P17655 700 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 GUCY2FP51841 1108 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 ZBTB6Q15916 424 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 GLRA4Q5JXX5 417 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 HGSNATQ68CP4 663 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 ENOSF1Q7L5Y1 443 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 MRPL10Q7Z7H8 261 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 FMNL3Q8IVF7 1028 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 SECISBP2LQ93073 1101 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 RHOXF2Q9BQY4 288 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 ITGA11Q9UKX5 1188 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 JRKLQ9Y4A0 524 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 NUB1Q9Y5A7 615 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 UMODL1Q5DID0 1318 aa20.7■□□□□ 0.9
PDLIM2-204ENST00000397760 POLR3GO15318 223 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 NBNO60934 754 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF623O75123 536 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 ATP1A1P05023 1023 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 KCNE1P15382 129 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 FERP16591 822 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 KLHL30Q0D2K2 578 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 GPNMBQ14956 572 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 TDRD12Q587J7 1177 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF572Q7Z3I7 529 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 NOA1Q8NC60 698 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 BEST2Q8NFU1 509 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 CXorf38Q8TB03 319 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 LPPQ93052 612 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 TSPAN18Q96SJ8 248 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 SSU72P8A0A1W2PR75 194 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 MEIS3P2A8K0S8 358 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 TACC1O75410 805 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 SKIP12755 728 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF699Q32M78 642 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 NECAB2Q7Z6G3 386 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 LACRTQ9GZZ8 138 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 XYLT2Q9H1B5 865 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 MED4Q9NPJ6 270 aa20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 UBQLN1Q9UMX0 589 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-204ENST00000397760 EVI5O60447 810 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 POLR2BP30876 1174 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 EIF4A3P38919 411 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 USP8P40818 1118 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 RBP5P82980 135 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 CUL2Q13617 745 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 RTN4RL1Q86UN2 441 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 SHC3Q92529 594 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 TAF4BQ92750 862 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 C18orf25Q96B23 403 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 ZFP42Q96MM3 310 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 PPP1R12CQ9BZL4 782 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 TUBGCP4Q9UGJ1 667 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms