RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 WDR44Q5JSH3 913 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SPOPLQ6IQ16 392 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TMEM173Q86WV6 379 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SLC39A11Q8N1S5 342 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 BCL7CQ8WUZ0 217 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ELMO3Q96BJ8 720 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LSM14BQ9BX40 385 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SIX2Q9NPC8 291 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 AAASQ9NRG9 546 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NUB1Q9Y5A7 615 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NLRC5Q86WI3 1866 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 A0A1W2PPC1 479 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 KPNA7A9QM74 516 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NT5C1B-RDH14C9J2C7 533 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 CA3P07451 260 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ZNF75DP51815 510 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ZNF667Q5HYK9 610 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 HASPINQ8TF76 798 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 IGSF21Q96ID5 467 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NT5C1BQ96P26 610 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PLCB1Q9NQ66 1216 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 GDAP2Q9NXN4 497 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ADAM28Q9UKQ2 775 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 RWDD3Q9Y3V2 267 aa20.91■□□□□ 0.94
MAP1LC3A-203ENST00000397709 EFEMP2O95967 443 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 BRCC3P46736 316 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 APBA1Q02410 837 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LRMPQ12912 555 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 WDR72Q3MJ13 1102 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TIGD5Q53EQ6 642 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TATDN2Q93075 761 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 MRFAP1L1Q96HT8 127 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 FAXDC2Q96IV6 333 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SUSD3Q96L08 255 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NIF3L1Q9GZT8 377 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 APEX2Q9UBZ4 518 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 MSRAQ9UJ68 235 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 POLIQ9UNA4 740 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PCDHB12Q9Y5F1 795 aa20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LAMA2P24043 3122 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3A-203ENST00000397709 M0QZQ0 153 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TADA2AO75478 443 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 NOL4O94818 638 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PPM1AP35813 382 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 BMPR1AP36894 532 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 ASPAP45381 313 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 MRE11P49959 708 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 KLHDC7AQ5VTJ3 777 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PHLDB3Q6NSJ2 640 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 LIMS2Q7Z4I7 341 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 ARHGEF19Q8IW93 802 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SENP8Q96LD8 212 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 GANQ9H2C0 597 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SPG21Q9NZD8 308 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 NXF1Q9UBU9 619 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SNX9Q9Y5X1 595 aa20.89■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TSC2P49815 1807 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SF3B1O75533 1304 aaKnown RBP eCLIP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 ITIH6Q6UXX5 1313 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 I3L4J1 428 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 CLSTN1O94985 981 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 P4HA1P13674 534 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TNNC1P63316 161 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 GCNT1Q02742 428 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TAP1Q03518 808 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PRPF38BQ5VTL8 546 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 FUT10Q6P4F1 479 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 VSTM4Q8IW00 320 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 RNF168Q8IYW5 571 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TOP6BLQ8N6T0 577 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PCMTD1Q96MG8 357 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SAMD11Q96NU1 681 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 C17orf80Q9BSJ5 609 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PLVAPQ9BX97 442 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 VN1R3Q9BXE9 311 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 BCO2Q9BYV7 579 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 NKX2-4Q9H2Z4 354 aa20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 FAM207AQ9NSI2 230 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 COLQQ9Y215 455 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-203ENST00000397709 C5orf67F2Z3F1 127 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 CYB561D2O14569 222 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 EPHB6O15197 1021 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TRAPPC3O43617 180 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 CTNNB1P35222 781 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 ERVK-21P61565 698 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PLCB3Q01970 1234 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 ELAVL2Q12926 359 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 CUL2Q13617 745 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 GJB7Q6PEY0 223 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 DSTYKQ6XUX3 929 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 SPRED2Q7Z698 418 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 PPM1KQ8N3J5 372 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 NEK11Q8NG66 645 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TMEM169Q96HH4 297 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 TGS1Q96RS0 853 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 GPR62Q9BZJ7 368 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 FBXL5Q9UKA1 691 aa20.87■□□□□ 0.93
MAP1LC3A-203ENST00000397709 AJAP1Q9UKB5 411 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms