RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FNIP2Q9P278 1114 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 SIX4Q9UIU6 781 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 AGAP1Q9UPQ3 857 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 UNC80Q8N2C7 3258 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 PPP1R3GB7ZBB8 358 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 EPCAMP16422 314 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 CCNE1P24864 410 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 CLCN4P51793 760 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 LRRC63Q05C16 580 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 SCARA3Q6AZY7 606 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 FAM186BQ8IYM0 893 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 APPL2Q8NEU8 664 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 PARD3BQ8TEW8 1205 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 SLC22A17Q8WUG5 538 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 CASP10Q92851 521 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 CLEC1BQ9P126 229 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 MTRRQ9UBK8 725 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 CTNND2Q9UQB3 1225 aa22.86■■□□□ 1.25
TSPAN4-206ENST00000397408 LRRIQ3A6PVS8 624 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 CETN3O15182 167 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 MAPK13O15264 365 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 MBD3O95983 291 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 PAX3P23760 479 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 PNPLA4P41247 253 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 RBP5P82980 135 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 CLUL1Q15846 466 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 SV2CQ496J9 727 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 LRRC52Q8N7C0 313 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 NELFBQ8WX92 580 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 SENP8Q96LD8 212 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 CLSTN3Q9BQT9 956 aa22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 R3HCC1Q9Y3T6 440 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 TIMM13Q9Y5L4 95 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-206ENST00000397408 GLUD1P00367 558 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 ODC1P11926 461 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 PSMC2P35998 433 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 DLG4P78352 724 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 BFSP1Q12934 665 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 TMEM184AQ6ZMB5 413 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 TRAPPC11Q7Z392 1133 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 PALB2Q86YC2 1186 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 ATXN2LQ8WWM7 1075 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 ZNF516Q92618 1163 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 BACE2Q9Y5Z0 518 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 PLXNA3P51805 1871 aa22.84■■□□□ 1.25
TSPAN4-206ENST00000397408 ADAM12O43184 909 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 MRPS5P82675 430 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 FKBP3Q00688 224 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 PAK1Q13153 545 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 AAK1Q2M2I8 961 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 LEXMQ3ZCV2 418 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 RSPO2Q6UXX9 243 aaPredicted RBP22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 INTS8Q75QN2 995 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 ZC3H3Q8IXZ2 948 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 TMC2Q8TDI7 906 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 MKNK1Q9BUB5 465 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 CD207Q9UJ71 328 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 CDY1Q9Y6F8 540 aa22.83■■□□□ 1.25
TSPAN4-206ENST00000397408 TSC2P49815 1807 aa22.83■■□□□ 1.24
TSPAN4-206ENST00000397408 ARHGEF37A1IGU5 675 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 KPNA7A9QM74 516 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 H7C4K7 107 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 EPB41P11171 864 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 KRT13P13646 458 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TYMPP19971 482 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 OR1D2P34982 312 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 VAMP7P51809 220 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 CLDN10P78369 228 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 YWHAHQ04917 246 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 MRPL58Q14197 206 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 CTXN3Q4LDR2 81 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 ZNF280DQ6N043 979 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TTI2Q6NXR4 508 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 ANKRD54Q6NXT1 300 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 USP37Q86T82 979 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 BORCS6Q96GS4 357 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 MSLNLQ96KJ4 702 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 DZANK1Q9NVP4 752 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 BICDL2A1A5D9 508 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 CYB561D2O14569 222 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TGM5O43548 720 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TRIM49P0CI25 452 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TRIM49CP0CI26 452 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 KCNQ1P51787 676 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 AP3M2P53677 418 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 STX17P56962 302 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 BIRC3Q13489 604 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 TDRD10Q5VZ19 366 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 FBXL5Q9UKA1 691 aa22.82■■□□□ 1.24
TSPAN4-206ENST00000397408 SPDYE4A6NLX3 237 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 SLC16A3O15427 465 aaKnown RBP22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 PHACTR2O75167 634 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 MYO1EQ12965 1108 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 C1orf220Q5T0J3 134 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 OVOS1Q6IE37 1185 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 SYCE2Q6PIF2 218 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 HPDLQ96IR7 371 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 ASB2Q96Q27 587 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 DUSP9Q99956 384 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms