RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 TRIML1Q8N9V2 468 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 OR5B17Q8NGF7 314 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 MSLNLQ96KJ4 702 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 ZNF560Q96MR9 790 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 POP1Q99575 1024 aaKnown RBP22.57■■□□□ 1.2
SEC13-207ENST00000397105 CGRRF1Q99675 332 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 CLSTN3Q9BQT9 956 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 DZANK1Q9NVP4 752 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 MTRRQ9UBK8 725 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 DPP7Q9UHL4 492 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 PTPRJQ12913 1337 aa22.57■■□□□ 1.2
SEC13-207ENST00000397105 MAPK13O15264 365 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 SPTLC1O15269 473 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 GLUD1P00367 558 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 KRT19P08727 400 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 CASP4P49662 377 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 SV2CQ496J9 727 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 USP37Q86T82 979 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 LRRC52Q8N7C0 313 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 BRWD1Q9NSI6 2320 aa22.56■■□□□ 1.2
SEC13-207ENST00000397105 ATG2AQ2TAZ0 1938 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 CETN3O15182 167 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 AKAP3O75969 853 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 ODC1P11926 461 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 BMP6P22004 513 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 PSMC2P35998 433 aaKnown RBP22.55■■□□□ 1.2
SEC13-207ENST00000397105 AP3M2P53677 418 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 LRRC63Q05C16 580 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 MRPL58Q14197 206 aaKnown RBP22.55■■□□□ 1.2
SEC13-207ENST00000397105 CLUL1Q15846 466 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 ANKRD40Q6AI12 368 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 PTCRAQ6ISU1 281 aaPredicted RBP22.55■■□□□ 1.2
SEC13-207ENST00000397105 TRAPPC11Q7Z392 1133 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 GLYCTKQ8IVS8 523 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.55■■□□□ 1.2
SEC13-207ENST00000397105 CXorf38Q8TB03 319 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 PARD3BQ8TEW8 1205 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 FAM84AQ96KN4 292 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 SENP8Q96LD8 212 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 NUP62CLQ9H1M0 184 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 DSEQ9UL01 958 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 FAM50BQ9Y247 325 aa22.55■■□□□ 1.2
SEC13-207ENST00000397105 KPNA7A9QM74 516 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 TGM5O43548 720 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 OAZ2O95190 189 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 TYMPP19971 482 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 CCNE1P24864 410 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 OR1D2P34982 312 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 KCNQ1P51787 676 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 CLDN10P78369 228 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 YWHAHQ04917 246 aaPredicted RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 MYO1EQ12965 1108 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 CTXN3Q4LDR2 81 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 TJAP1Q5JTD0 557 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 INTS8Q75QN2 995 aaKnown RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 FAM186BQ8IYM0 893 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 TMC2Q8TDI7 906 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 OXCT2Q9BYC2 517 aaPredicted RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 GZF1Q9H116 711 aaPredicted RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 SIX4Q9UIU6 781 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 TIMM13Q9Y5L4 95 aaPredicted RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 CDY1Q9Y6F8 540 aa22.54■■□□□ 1.2
SEC13-207ENST00000397105 PDCD11Q14690 1871 aaKnown RBP22.54■■□□□ 1.2
SEC13-207ENST00000397105 SPDYE4A6NLX3 237 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 PPP1R3GB7ZBB8 358 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 CYB561D2O14569 222 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 TBC1D4O60343 1298 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 KRT13P13646 458 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 CD44P16070 742 aaKnown RBP22.53■■□□□ 1.2
SEC13-207ENST00000397105 FKBP3Q00688 224 aaKnown RBP22.53■■□□□ 1.2
SEC13-207ENST00000397105 SMAD4Q13485 552 aaKnown RBP22.53■■□□□ 1.2
SEC13-207ENST00000397105 RAB33AQ14088 237 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 ZNF280DQ6N043 979 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 LILRA6Q6PI73 481 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 SYCE2Q6PIF2 218 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 METTL23Q86XA0 190 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 GPT2Q8TD30 523 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 PLEKHO2Q8TD55 490 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 HDAC7Q8WUI4 952 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 ZNF516Q92618 1163 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 BORCS6Q96GS4 357 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 PLEKHA4Q9H4M7 779 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 FBXL5Q9UKA1 691 aa22.53■■□□□ 1.2
SEC13-207ENST00000397105 GRXCR2A6NFK2 248 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 LRRIQ3A6PVS8 624 aaPredicted RBP22.52■■□□□ 1.2
SEC13-207ENST00000397105 IKBKBO14920 756 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 ADAM12O43184 909 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 PHACTR2O75167 634 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 SPATA31D3P0C874 917 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 BMP1P13497 986 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 VAMP7P51809 220 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 PMS1P54277 932 aaKnown RBP22.52■■□□□ 1.2
SEC13-207ENST00000397105 ENPEPQ07075 957 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 BFSP1Q12934 665 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 OVOS1Q6IE37 1185 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 SLC8B1Q6J4K2 584 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 KLHL10Q6JEL2 608 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 RSPO2Q6UXX9 243 aaPredicted RBP22.52■■□□□ 1.2
SEC13-207ENST00000397105 SPATA31D4Q6ZUB0 917 aa22.52■■□□□ 1.2
SEC13-207ENST00000397105 SMRP1Q8NCR6 262 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms