RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 DENND3A2RUS2 1198 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 IRF6O14896 467 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 MYCLP12524 364 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 ZFYVE27Q5T4F4 411 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 SNRNP48Q6IEG0 339 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 CYP4F22Q6NT55 531 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 REPS2Q8NFH8 660 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 GRK7Q8WTQ7 553 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 CDCA5Q96FF9 252 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 TRAIPQ9BWF2 469 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 NINJ2Q9NZG7 142 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 TBX20Q9UMR3 447 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 EXOC7Q9UPT5 735 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 RALAP11233 206 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 SOX10P56693 466 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 TTLL12Q14166 644 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 TAF11Q15544 211 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 CLEC16AQ2KHT3 1053 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 LMBRD2Q68DH5 695 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 RHBDF2Q6PJF5 856 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 SV2AQ7L0J3 742 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 GSTA5Q7RTV2 222 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 PRUNE1Q86TP1 453 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 RNF217Q8TC41 542 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 DDX1Q92499 740 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 RMDN2Q96LZ7 410 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 USTQ9Y2C2 406 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 CTDP1Q9Y5B0 961 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 PPP2R3BQ9Y5P8 575 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 OTOFQ9HC10 1997 aa14.9□□□□□ -0.02
CCHCR1-203ENST00000396268 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 SLC8A3P57103 927 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 MRPS9P82933 396 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 FITM2Q8N6M3 262 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ATL2Q8NHH9 583 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 CKAP2Q8WWK9 683 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 DCLK3Q9C098 648 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 AGO4Q9HCK5 861 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ZNF214Q9UL59 606 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ZMYND8Q9ULU4 1186 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ARL2BPQ9Y2Y0 163 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 O00370 1275 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 GRIN3BO60391 1043 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ZBED4O75132 1171 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 IVDP26440 423 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ABL2P42684 1182 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 GPC3P51654 580 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 COPS2P61201 443 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 DMP1Q13316 513 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 PTK6Q13882 451 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 BAATQ14032 418 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ANKRD20A2Q5SQ80 823 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ANKRD20A1Q5TYW2 823 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ANKRD20A3Q5VUR7 823 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 MAIP1Q8WWC4 291 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 ZCWPW1Q9H0M4 648 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 RNF146Q9NTX7 359 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 NKX1-2Q9UD57 310 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 NAALADL1Q9UQQ1 740 aa14.89□□□□□ -0.03
CCHCR1-203ENST00000396268 MAPK13O15264 365 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 OAS1P00973 400 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 CETPP11597 493 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 DSG3P32926 999 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 MAN1A1P33908 653 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 MSH2P43246 934 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 NSFP46459 744 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 NPTX2P47972 431 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 TMED2Q15363 201 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 CATSPERGQ6ZRH7 1159 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 MCOLN2Q8IZK6 566 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 MAB21L3Q8N8X9 362 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 SLCO2A1Q92959 643 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 TMEM237Q96Q45 408 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 ADAM22Q9P0K1 906 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 KLHL14Q9P2G3 628 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 SPDYE16A6NNV3 312 aaPredicted RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 HNRNPDLO14979 420 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 NCKAP1LP55160 1127 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 GRIK3Q13003 919 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 ZNF268Q14587 947 aaPredicted RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 NOL9Q5SY16 702 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 ARHGEF18Q6ZSZ5 1173 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 PASD1Q8IV76 773 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 GBP7Q8N8V2 638 aaPredicted RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 TMEM161BQ8NDZ6 487 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 SPIRE2Q8WWL2 714 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 BICD1Q96G01 975 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 CCDC77Q9BR77 488 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 ETNK1Q9HBU6 452 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 SPATS2LQ9NUQ6 558 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 MROH7Q68CQ1 1323 aa14.88□□□□□ -0.03
CCHCR1-203ENST00000396268 RASA4BC9J798 803 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms