RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FBXL5Q9UKA1 691 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PCDHB7Q9Y5E2 793 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SNX9Q9Y5X1 595 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FER1L4A9Z1Z3 1794 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FAM47DPA6NHR8 397 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TCP11X1B4DZS4 312 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SPRP35270 261 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 GALCP54803 685 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 IL31Q6EBC2 164 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 VPS37AQ8NEZ2 397 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ZMAT2Q96NC0 199 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MOV10L1Q9BXT6 1211 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 VCPKMTQ9H867 229 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PKD2L2Q9NZM6 624 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CDY2AQ9Y6F7 541 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CDY1Q9Y6F8 540 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SLC4A7Q9Y6M7 1214 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 RPS6KA5O75582 802 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PDK1Q15118 436 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 LRIG3Q6UXM1 1119 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ATG9AQ7Z3C6 839 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TAGAPQ8N103 731 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SLC30A5Q8TAD4 765 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FAM151AQ8WW52 585 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CCDC126Q96EE4 140 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MYO10Q9HD67 2058 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 DIP2AQ14689 1571 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PRRG1O14668 218 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 HMGB3O15347 200 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ZSCAN9O15535 394 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 H2AFYO75367 372 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FGFR4P22455 802 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SYTL3Q4VX76 610 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 EFCAB12Q6NXP0 572 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SCFD2Q8WU76 684 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CPA5Q8WXQ8 436 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 RMDN2Q96LZ7 410 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ZC4H2Q9NQZ6 224 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SUFUQ9UMX1 484 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 GSNP06396 782 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 CYP2C8P10632 490 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 KCNA2P16389 499 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 MDH1P40925 334 aaKnown RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 NLRP11P59045 1033 aaKnown RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 PTK6Q13882 451 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 DCAF6Q58WW2 860 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 EFL1Q7Z2Z2 1120 aaKnown RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA21Q7Z572 469 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 ADSSL1Q8N142 457 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 ABHD8Q96I13 439 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 PDLIM2Q96JY6 352 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 CHP1Q99653 195 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 AFF4Q9UHB7 1163 aaKnown RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 SLC30A1Q9Y6M5 507 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 CCDC195A0A1B0GUA6 201 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 EEF2KO00418 725 aaKnown RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 ARIH2O95376 493 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 NDUFB10O96000 172 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 SLC2A3P11169 496 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 ATF7IP2Q5U623 682 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 STYK1Q6J9G0 422 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 PKN3Q6P5Z2 889 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 UNC45AQ9H3U1 944 aa5.71□□□□□ -1.49
VPS13C-204ENST00000395898 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.71□□□□□ -1.49
VPS13C-204ENST00000395898 CCDC78A2IDD5 438 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 C16orf96A6NNT2 1141 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MYO1CO00159 1063 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 APOA1P02647 267 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 C6orf222P0C671 652 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 NMT1P30419 496 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TWF1Q12792 350 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TJAP1Q5JTD0 557 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 SAMD3Q8N6K7 520 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 CEP70Q8NHQ1 597 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ABTB1Q969K4 478 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 SPATA17Q96L03 361 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PGM1P36871 562 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 NCKAP1LP55160 1127 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 CENPCQ03188 943 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 EIF2B5Q13144 721 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 BAATQ14032 418 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 AGBL2Q5U5Z8 902 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 SDE2Q6IQ49 451 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PARP9Q8IXQ6 854 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TBC1D4O60343 1298 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 GRIN3BO60391 1043 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MYL2P10916 166 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 RAP1GDS1P52306 607 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 DYNC1I2Q13409 638 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 FAM83EQ2M2I3 478 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TFDP3Q5H9I0 405 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF34Q8IZ26 560 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PHF21AQ96BD5 680 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ATXN7L3BQ96GX2 97 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 AGAP3Q96P47 875 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 KLC4Q9NSK0 619 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ARHGEF38Q9NXL2 777 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ZC3H7BQ9UGR2 993 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 LMTK2Q8IWU2 1503 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms