RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 AFG1LQ8WV93 481 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MRPL9Q9BYD2 267 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC88CQ9P219 2028 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TRIM49P0CI25 452 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TRIM49CP0CI26 452 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ACOT2P49753 483 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NLRP11P59045 1033 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 COG7P83436 770 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CYP24A1Q07973 514 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 DRP2Q13474 957 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 LENG9Q96B70 501 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KIF12Q96FN5 646 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TUBB6Q9BUF5 446 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PARD6BQ9BYG5 372 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MAFBQ9Y5Q3 323 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 A0A087X0T9 212 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ERI2A8K979 691 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KBTBD13C9JR72 458 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CAND2O75155 1236 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 RPS6KA5O75582 802 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FAM228BP0C875 321 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PSEN1P49768 467 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KLHL38Q2WGJ6 581 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 EFHC2Q5JST6 749 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ANO5Q75V66 913 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 C3orf20Q8ND61 904 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 GRAMD1AQ96CP6 724 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NUP85Q9BW27 656 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC68Q9H2F9 335 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 DNAJC18Q9H819 358 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SPTAN1Q13813 2472 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 IQANK1A0A1B0GTG1 560 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PDHXO00330 501 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 IGF2BP3O00425 579 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ENC1O14682 589 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 LCA5LO95447 670 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 THP07101 528 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SLC9A1P19634 815 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CENPCQ03188 943 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 VEPH1Q14D04 833 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CELF3Q5SZQ8 465 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NUDT18Q6ZVK8 323 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SESTD1Q86VW0 696 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SHC3Q92529 594 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 RUSC1Q9BVN2 902 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 BARX2Q9UMQ3 279 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TLDC2A0PJX2 215 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SGK1O00141 431 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 EFCAB14O75071 495 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KLRC1P26715 233 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 AIF1P55008 147 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PTENP60484 403 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ZBTB16Q05516 673 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 GFPT1Q06210 699 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 LAMTOR4Q0VGL1 99 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 DSTYKQ6XUX3 929 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SMIM5Q71RC9 77 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SH3TC2Q8TF17 1288 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 APBA2Q99767 749 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PCM1Q15154 2024 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 B3GAT3O94766 335 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MAP3K21Q5TCX8 1036 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MMGT1Q8N4V1 131 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PPM1EQ8WY54 764 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 HSFY1Q96LI6 401 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ERP44Q9BS26 406 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CNPY3Q9BT09 278 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 INTS2Q9H0H0 1204 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SEMA6BQ9H3T3 888 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SMG5Q9UPR3 1016 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF318Q5VUA4 2279 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NBASA2RRP1 2371 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 A0A0B4J269 797 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SMIM35A0A1B0GVV1 85 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FOXN3O00409 490 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 HADHBP55084 474 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CHADLQ6NUI6 762 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ABHD15Q6UXT9 468 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PSTKQ8IV42 348 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PLCD3Q8N3E9 789 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CYP2W1Q8TAV3 490 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SPATA18Q8TC71 538 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PPP4R1Q8TF05 950 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NGRNQ9NPE2 291 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 IRS2Q9Y4H2 1338 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 RTTNQ86VV8 2226 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ATAD5Q96QE3 1844 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 HNRNPCL1O60812 293 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZBED1O96006 694 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ELF1P32519 619 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CLCN6P51797 869 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ARL4CP56559 192 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SPIRE1Q08AE8 756 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZC2HC1CQ53FD0 456 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 NFRKBQ6P4R8 1299 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC60Q8IWA6 550 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 KLHL7Q8IXQ5 586 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 VPS52Q8N1B4 723 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ATP11CQ8NB49 1132 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms