RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 FAXDC2Q96IV6 333 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 PCDHB4Q9Y5E5 795 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 CXCL10P02778 98 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 ACO1P21399 889 aaKnown RBP21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 CLCN1P35523 988 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 SCNN1GP51170 649 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 KRT83P78385 493 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 SOX4Q06945 474 aaPredicted RBP21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 LRRC52Q8N7C0 313 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 GOLGA2P5Q9HBQ8 144 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 MIOSQ9NXC5 875 aa21.88■■□□□ 1.09
VCPKMT-202ENST00000395860 ANO9A1A5B4 782 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 PPEF2O14830 753 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 AFF1P51825 1210 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 YWHAEP62258 255 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 TNNC1P63316 161 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 FAM189BP81408 668 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 GFPT1Q06210 699 aaPredicted RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 TMEM270Q6UE05 265 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 DEFB128Q7Z7B8 93 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 ZNF560Q96MR9 790 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 BCO2Q9BYV7 579 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 ADAMTS1Q9UHI8 967 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 PIRO00625 290 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 ENPP3O14638 875 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 LCA5LO95447 670 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 WEE2P0C1S8 567 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 CD58P19256 250 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 EN2P19622 333 aaPredicted RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 ANXA13P27216 316 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 CYP27A1Q02318 531 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 SLC47A2Q86VL8 602 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 UBR7Q8N806 425 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 PPP1R13BQ96KQ4 1090 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 PRDM5Q9NQX1 630 aaPredicted RBP21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 INPP5FQ9Y2H2 1132 aa21.87■■□□□ 1.09
VCPKMT-202ENST00000395860 LRPAP1P30533 357 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 PNPLA4P41247 253 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 PDE6CP51160 858 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 BMS1Q14692 1282 aaKnown RBP21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 SLC18A3Q16572 532 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 MICAL3Q7RTP6 2002 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 CISHQ9NSE2 258 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 CNTN6Q9UQ52 1028 aa21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 REXO2Q9Y3B8 237 aaKnown RBP21.86■■□□□ 1.09
VCPKMT-202ENST00000395860 A0A087X0T9 212 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 POMCP01189 267 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 FAM228BP0C875 321 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 CYP11B1P15538 503 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 TNFAIP3P21580 790 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 RAP1GAPP47736 663 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 BPIFB4P59827 614 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 REXO1L1PQ8IX06 675 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 RBBP8NLQ8NC74 664 aaPredicted RBP21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 EPS8L1Q8TE68 723 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 MMS19Q96T76 1030 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 AGPAT1Q99943 283 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 ACP6Q9NPH0 428 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 TMEM161AQ9NX61 479 aa21.85■■□□□ 1.09
VCPKMT-202ENST00000395860 ZNF263O14978 683 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 RFC2P35250 354 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 GRIK3Q13003 919 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 NAB2Q15742 525 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 TCTN1Q2MV58 587 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 GLB1LQ6UWU2 654 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 KIAA1328Q86T90 577 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 NOP9Q86U38 636 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SLC20A1Q8WUM9 679 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 ELAC1Q9H777 363 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SMYD3Q9H7B4 428 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 CYP3A43Q9HB55 503 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SEPT11Q9NVA2 429 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SNX9Q9Y5X1 595 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 GOLGA6L9A6NEM1 432 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 TAF6P49848 677 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SV2CQ496J9 727 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 SYT11Q9BT88 431 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 NOCTQ9UK39 431 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 PCDHB7Q9Y5E2 793 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 PCDHA13Q9Y5I0 950 aa21.84■■□□□ 1.09
VCPKMT-202ENST00000395860 INPPL1O15357 1258 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 TIMP1P01033 207 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 CDH8P55286 799 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 TAF3Q5VWG9 929 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 SMYD5Q6GMV2 418 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 GLYCTKQ8IVS8 523 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 RPUSD2Q8IZ73 545 aaKnown RBP21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 LNX1Q8TBB1 728 aaPredicted RBP21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 SDCBP2Q9H190 292 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 LUC7LQ9NQ29 371 aaKnown RBP21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 LRFN2Q9ULH4 789 aa21.83■■□□□ 1.09
VCPKMT-202ENST00000395860 KPNA7A9QM74 516 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 DDX3XO00571 662 aaKnown RBP eCLIP21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 KIAA0355O15063 1070 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 RAG1P15918 1043 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 MAGEA1P43355 309 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CLLU1OSQ5K130 101 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 URGCPQ8TCY9 931 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 NAGPAQ9UK23 515 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms