RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 KIAA0586Q9BVV6 1533 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CCDC144AA2RUR9 1427 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 TLR3O15455 904 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 SPOPO43791 374 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 TRPA1O75762 1119 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 FGF4P08620 206 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 HMOX1P09601 288 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 AMPHP49418 695 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 FXR2P51116 673 aaKnown RBP eCLIP4.53□□□□□ -1.68
HERC4-204ENST00000395198 RPP30P78346 268 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 FOXO1Q12778 655 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PLD1Q13393 1074 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CRYMQ14894 314 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 EFTUD2Q15029 972 aaKnown RBP eCLIP4.53□□□□□ -1.682e-6■□□□□ 10.5
HERC4-204ENST00000395198 FAM110CQ1W6H9 321 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 HFEQ30201 348 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ZACNQ401N2 412 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 FAM26FQ5R3K3 315 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 TRAPPC3LQ5T215 181 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 C10orf67Q8IYJ2 551 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 C1orf162Q8NEQ5 155 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 TOR1AIP2Q8NFQ8 470 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 DDI1Q8WTU0 396 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CHTF18Q8WVB6 975 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 HGH1Q9BTY7 390 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CDK19Q9BWU1 502 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CERS4Q9HA82 394 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 EHD2Q9NZN4 543 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 RPS6KA6Q9UK32 745 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PCDHB6Q9Y5E3 794 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PCDHB2Q9Y5E7 798 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 RAB3GAP2Q9H2M9 1393 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 NUP160Q12769 1436 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CD109Q6YHK3 1445 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CTAGE15A4D2H0 777 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 HAT1O14929 419 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 LRRN2O75325 713 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 BCAS2O75934 225 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 KLHL2O95198 593 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CTAGE8P0CG41 777 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PDE6AP16499 860 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PTBP1P26599 531 aaKnown RBP eCLIP4.52□□□□□ -1.691e-6■■□□□ 13.4
HERC4-204ENST00000395198 RXRBP28702 533 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DNM2P50570 870 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 BLVRAP53004 296 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 RBP5P82980 135 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TRIM25Q14258 630 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 HERC3Q15034 1050 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 FSCBQ5H9T9 825 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SLC9C2Q5TAH2 1124 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 NDUFAF5Q5TEU4 345 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CTAGE6Q86UF2 777 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CTAGE4Q8IX94 777 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TXN2Q99757 166 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ERP44Q9BS26 406 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 SRCIN1Q9C0H9 1055 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DENND2DQ9H6A0 471 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 LCMT1Q9UIC8 334 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 MYPNQ86TC9 1320 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 MYOM3Q5VTT5 1437 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 H0YAE9 185 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SMAD6O43541 496 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 EVI5O60447 810 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 MAN1A2O60476 641 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 MYCLP12524 364 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 PMS2P54278 862 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 GPX6P59796 221 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 NOP14P78316 857 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 STIM1Q13586 685 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 MTMR2Q13614 643 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CEP78Q5JTW2 689 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DGKKQ5KSL6 1271 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DPY19L2Q6NUT2 758 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SASS6Q6UVJ0 657 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 LRRC31Q6UY01 552 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ARHGAP22Q7Z5H3 698 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ANKLE2Q86XL3 938 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 VWA5B2Q8N398 1253 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 BANPQ8N9N5 519 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DENND6BQ8NEG7 585 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 HUS1BQ8NHY5 278 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SMARCC2Q8TAQ2 1214 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PEX13Q92968 403 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SPATA9Q9BWV2 254 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PINK1Q9BXM7 581 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 C1orf21Q9H246 121 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TMEM206Q9H813 350 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ARFGAP3Q9NP61 516 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SENP1Q9P0U3 644 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 INSRP06213 1382 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SYNJ1O43426 1573 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PLEKHG2Q9H7P9 1386 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 A4D1N5 150 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TRDMT1O14717 391 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 IFIT3O14879 490 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 PRAMEF12O95522 483 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ACAA1P09110 424 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 IFNAR1P17181 557 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms