RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DCDC2BA2VCK2 349 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 HEPACAM2A8MVW5 462 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 CCNE1P24864 410 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 CDC25AP30304 524 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 EPHA5P54756 1037 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 SPEM2Q0P670 501 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 STRN3Q13033 797 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 NOLC1Q14978 699 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRAF4-203ENST00000394925 KRT79Q5XKE5 535 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 C1orf186Q6ZWK4 172 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 KCNK18Q7Z418 384 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 SHKBP1Q8TBC3 707 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 LLPHQ9BRT6 129 aaKnown RBP23.05■■□□□ 1.28
TRAF4-203ENST00000394925 C17orf75Q9HAS0 396 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 PCDHB6Q9Y5E3 794 aa23.05■■□□□ 1.28
TRAF4-203ENST00000394925 MYH11P35749 1972 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 TOM1L1O75674 476 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 CHRNB1P11230 501 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 SPAG1Q07617 926 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 RAD51AP2Q09MP3 1159 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 PRR23BQ6ZRT6 265 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 CELF5Q8N6W0 485 aaKnown RBP23.04■■□□□ 1.28
TRAF4-203ENST00000394925 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 PGLYRP2Q96PD5 576 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 RTKNQ9BST9 563 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 YIPF1Q9Y548 306 aa23.04■■□□□ 1.28
TRAF4-203ENST00000394925 TIMM13Q9Y5L4 95 aaPredicted RBP23.04■■□□□ 1.28
TRAF4-203ENST00000394925 OR4Q2P0C623 313 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 CXCL12P48061 93 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
TRAF4-203ENST00000394925 SATB1Q01826 763 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 YWHAHQ04917 246 aaPredicted RBP23.03■■□□□ 1.28
TRAF4-203ENST00000394925 ZRSR1Q15695 479 aaKnown RBP23.03■■□□□ 1.28
TRAF4-203ENST00000394925 LAIR1Q6GTX8 287 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 YAF2Q8IY57 180 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 CSGALNACT1Q8TDX6 532 aa23.03■■□□□ 1.28
TRAF4-203ENST00000394925 NTPCRQ9BSD7 190 aaKnown RBP23.03■■□□□ 1.28
TRAF4-203ENST00000394925 A0A1W2PRU2 124 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 ARNTLO00327 626 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 VNN2O95498 520 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 CXCL8P10145 99 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 MATR3P43243 847 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRAF4-203ENST00000394925 HMGN5P82970 282 aaKnown RBP23.02■■□□□ 1.28
TRAF4-203ENST00000394925 GAS6Q14393 721 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 IL17AQ16552 155 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 GPIHBP1Q8IV16 184 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 TMEM161BQ8NDZ6 487 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 BEST2Q8NFU1 509 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 E2F7Q96AV8 911 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 RSPRY1Q96DX4 576 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 GPR88Q9GZN0 384 aa23.02■■□□□ 1.28
TRAF4-203ENST00000394925 M0QZQ0 153 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 CLDN3O15551 220 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 OAZ2O95190 189 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 GUCY2CP25092 1073 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 SMTNP53814 917 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 DUSP4Q13115 394 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 SPIRE2Q8WWL2 714 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 KIF12Q96FN5 646 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 MMTAG2Q9BU76 263 aaKnown RBP23.01■■□□□ 1.27
TRAF4-203ENST00000394925 TIPINQ9BVW5 301 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 LRRC3Q9BY71 257 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 CRISPLD1Q9H336 500 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.01■■□□□ 1.27
TRAF4-203ENST00000394925 RALGAPA1Q6GYQ0 2036 aa23.01■■□□□ 1.27
TRAF4-203ENST00000394925 SLC38A8A6NNN8 435 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 MAPTP10636 758 aaKnown RBP23■■□□□ 1.27
TRAF4-203ENST00000394925 PLS3P13797 630 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 U2AF2P26368 475 aaKnown RBP eCLIP23■■□□□ 1.271e-6■□□□□ 8.6
TRAF4-203ENST00000394925 LRPAP1P30533 357 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 SOX9P48436 509 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 KPNA1P52294 538 aaPredicted RBP23■■□□□ 1.27
TRAF4-203ENST00000394925 EPHB3P54753 998 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 MCL1Q07820 350 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 DMWDQ09019 674 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 PLD1Q13393 1074 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 SIM2Q14190 667 aaPredicted RBP23■■□□□ 1.27
TRAF4-203ENST00000394925 ZPBP2Q6X784 338 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 DTHD1Q6ZMT9 781 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 USP37Q86T82 979 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 TMC8Q8IU68 726 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 SPEM1Q8N4L4 309 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 HAPLN2Q9GZV7 340 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 DNAJC25Q9H1X3 360 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 PLEKHA5Q9HAU0 1116 aa23■■□□□ 1.27
TRAF4-203ENST00000394925 RBM12Q9NTZ6 932 aaKnown RBP23■■□□□ 1.27
TRAF4-203ENST00000394925 KMT2BQ9UMN6 2715 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-203ENST00000394925 CHURC1-FNTBB4DL54 471 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 CHADO15335 359 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 RETP07949 1114 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 CLTAP09496 248 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 FNTBP49356 437 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 MLLT6P55198 1093 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-203ENST00000394925 LRRC32Q14392 662 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 STXBP5Q5T5C0 1151 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 DSTYKQ6XUX3 929 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 OXCT2Q9BYC2 517 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-203ENST00000394925 KCNG1Q9UIX4 513 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 SLC27A5Q9Y2P5 690 aa22.99■■□□□ 1.27
TRAF4-203ENST00000394925 TTC26A0AVF1 554 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms