RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SPTLC2O15270 562 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 TBCAO75347 108 aaKnown RBP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 RHOP08100 348 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 CFHP08603 1231 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 ATF2P15336 505 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 CEBPBP17676 345 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 CASP1P29466 404 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 MCM4P33991 863 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 LILRA4P59901 499 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 PPP2R3AQ06190 1150 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 ANGPT1Q15389 498 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 CTXN3Q4LDR2 81 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 LIN9Q5TKA1 542 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 C9orf57Q5W0N0 161 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 SV2BQ7L1I2 683 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 SIX5Q8N196 739 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 TTC9BQ8N6N2 239 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 DTWD2Q8NBA8 298 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 OR10T2Q8NGX3 314 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 RASSF8Q8NHQ8 419 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 GPR152Q8TDT2 470 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 ING5Q8WYH8 240 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 LRRC3Q9BY71 257 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 DNAJC25Q9H1X3 360 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 RPF1Q9H9Y2 349 aaKnown RBP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 KBTBD4Q9NVX7 518 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATG4A-205ENST00000394892 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 NUB1Q9Y5A7 615 aa9.62□□□□□ -0.87
ATG4A-205ENST00000394892 PRPF6O94906 941 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 LMNAP02545 664 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 FCARP24071 287 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 GPC5P78333 572 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 EHHADHQ08426 723 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ADCY1Q08828 1119 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 STK38Q15208 465 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 PABPC1LQ4VXU2 614 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 L1TD1Q5T7N2 865 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ZC3H14Q6PJT7 736 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ATAD1Q8NBU5 361 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 NXPE3Q969Y0 559 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 SAAL1Q96ER3 474 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 SENP8Q96LD8 212 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 ZSWIM3Q96MP5 696 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 CYP4F11Q9HBI6 524 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 AVENQ9NQS1 362 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 OLFML3Q9NRN5 406 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 WNT16Q9UBV4 365 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 AGO2Q9UKV8 859 aaKnown RBP9.61□□□□□ -0.87
ATG4A-205ENST00000394892 INSL5Q9Y5Q6 135 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
ATG4A-205ENST00000394892 MYO10Q9HD67 2058 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 USP34Q70CQ2 3546 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 DOCK6Q96HP0 2047 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GOLGA8IPA6NC78 632 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GOLGA8JA6NMD2 632 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 H7C4K7 107 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 PPP6R2O75170 966 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 XYLBO75191 536 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 LRRN2O75325 713 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SOAT2O75908 522 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 YEATS4O95619 227 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 F13A1P00488 732 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SRFP11831 508 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 IDEP14735 1019 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GLULP15104 373 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GJA1P17302 382 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 GAP43P17677 238 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TYMPP19971 482 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 SCP2P22307 547 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 STAT6P42226 847 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TMEM132DQ14C87 1099 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 KYAT1Q16773 422 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TPGS2Q68CL5 300 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TANGO2Q6ICL3 276 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 ZNF280DQ6N043 979 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 EPM2AIP1Q7L775 607 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-205ENST00000394892 LRRTM3Q86VH5 581 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 TMC8Q8IU68 726 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 APPL2Q8NEU8 664 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 HVCN1Q96D96 273 aa9.6□□□□□ -0.87
ATG4A-205ENST00000394892 RSPRY1Q96DX4 576 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms