RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 PHF13Q86YI8 300 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 CNPY4Q8N129 248 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 OSBPL7Q9BZF2 842 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 ROPN1BQ9BZX4 212 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 ROPN1Q9HAT0 212 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 KLHL11Q9NVR0 708 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 FZD9O00144 591 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 TBXAS1P24557 533 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 TNFSF9P41273 254 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 KYNUQ16719 465 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 EXOC3L1Q86VI1 746 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 IPO4Q8TEX9 1081 aaKnown RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 JPH2Q9BR39 696 aaPredicted RBP17.7■□□□□ 0.42
PRDM5-202ENST00000394435 OSBPL8Q9BZF1 889 aa17.7■□□□□ 0.42
PRDM5-202ENST00000394435 IGKV6D-21A0A0A0MT36 114 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 CST3P01034 146 aaPredicted RBP17.69■□□□□ 0.42
PRDM5-202ENST00000394435 ATP13A4Q4VNC1 1196 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 MFSD5Q6N075 450 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 PRUNE1Q86TP1 453 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 KATNAL2Q8IYT4 538 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 KCNN1Q92952 543 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 VCPIP1Q96JH7 1222 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 TMEM134Q9H6X4 195 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 CNTN6Q9UQ52 1028 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 HNRNPH1P31943 449 aaKnown RBP17.69■□□□□ 0.42
PRDM5-202ENST00000394435 IFNAR2P48551 515 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 CHST13Q8NET6 341 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 FEZF2Q8TBJ5 459 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 ZNF606Q8WXB4 792 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 MTFR1LQ9H019 292 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 NEU2Q9Y3R4 380 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 SCINQ9Y6U3 715 aa17.69■□□□□ 0.42
PRDM5-202ENST00000394435 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
PRDM5-202ENST00000394435 PI4K2BG5E9Z4 385 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 ADCY3O60266 1144 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 FARP2O94887 1054 aaPredicted RBP17.68■□□□□ 0.42
PRDM5-202ENST00000394435 RFC5P40937 340 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 RPL7AP62424 266 aaKnown RBP17.68■□□□□ 0.42
PRDM5-202ENST00000394435 C1QBPQ07021 282 aaKnown RBP17.68■□□□□ 0.42
PRDM5-202ENST00000394435 TARBP2Q15633 366 aaKnown RBP17.68■□□□□ 0.42
PRDM5-202ENST00000394435 CNGA2Q16280 664 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 CCNG2Q16589 344 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 TAOK1Q7L7X3 1001 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 CCDC13Q8IYE1 715 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 FAM212AQ96EL1 285 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 TRAIPQ9BWF2 469 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 GGA3Q9NZ52 723 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 CTNNAL1Q9UBT7 734 aa17.68■□□□□ 0.42
PRDM5-202ENST00000394435 VGLL3A8MV65 326 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 FOXO6A8MYZ6 492 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 TTC4O95801 387 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 TCF4P15884 667 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 KCNV1Q6PIU1 500 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ZNF365Q70YC5 407 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 EFCC1Q9HA90 598 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 PARVAQ9NVD7 372 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 NINJ2Q9NZG7 142 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 SSC5DA1L4H1 1573 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 DNM1LO00429 736 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ATP2C2O75185 946 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 CREB1P16220 341 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 STAT5BP51692 787 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 CAV1Q03135 178 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ANKRD20A8PQ5CZ79 823 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 KAZNQ674X7 775 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 EXD1Q8NHP7 514 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ARHGEF2Q92974 986 aaKnown RBP17.67■□□□□ 0.42
PRDM5-202ENST00000394435 TCHPQ9BT92 498 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 HOMER3Q9NSC5 361 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
PRDM5-202ENST00000394435 ZNF132P52740 706 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 ZNF394Q53GI3 561 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 IZUMO3Q5VZ72 239 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 UBR7Q8N806 425 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 MGARPQ8TDB4 240 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 BBXQ8WY36 941 aaPredicted RBP17.66■□□□□ 0.42
PRDM5-202ENST00000394435 SERPINB12Q96P63 405 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 IMPG2Q9BZV3 1241 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 BTBD7Q9P203 1132 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 IP6K2Q9UHH9 426 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 VIMP08670 466 aaKnown RBP17.66■□□□□ 0.42
PRDM5-202ENST00000394435 KRT10P13645 584 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 MMP8P22894 467 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 BRD2P25440 801 aaKnown RBP17.66■□□□□ 0.42
PRDM5-202ENST00000394435 MYL6P60660 151 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 LRRC14Q15048 493 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 GSTA5Q7RTV2 222 aa17.66■□□□□ 0.42
PRDM5-202ENST00000394435 BRSK2Q8IWQ3 736 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms