RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 SESN3P58005 492 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 ACAD10Q6JQN1 1059 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 SLITRK1Q96PX8 696 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 CGRRF1Q99675 332 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 IFNA8P32881 189 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 MRPS25P82663 173 aaKnown RBP15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 SLC12A1Q13621 1099 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 CYP3A43Q9HB55 503 aa15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 PRDM5Q9NQX1 630 aaPredicted RBP15.17■□□□□ 0.02
PPARGC1B-203ENST00000394320 DFFAO00273 331 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 EEF2KO00418 725 aaKnown RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 GZMAP12544 262 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 PDCLQ13371 301 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 NCAPHQ15003 741 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 TRIM65Q6PJ69 517 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 TBC1D1Q86TI0 1168 aaPredicted RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 YAF2Q8IY57 180 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 TSPAN17Q96FV3 270 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 FGD4Q96M96 766 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 LBHD1Q9BQE6 289 aaPredicted RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 TPX2Q9ULW0 747 aaKnown RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 ALG6Q9Y672 507 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 MANSC4A6NHS7 340 aaPredicted RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 VDRP11473 427 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 CDR2Q01850 454 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 FAM133BQ5BKY9 247 aaKnown RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 NUDCD3Q8IVD9 361 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 EXT2Q93063 718 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 MRGBPQ9NV56 204 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 DPP3Q9NY33 737 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 SMIM24O75264 130 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 PDGFRBP09619 1106 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 ATICP31939 592 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 SLC13A4Q9UKG4 626 aa15.16■□□□□ 0.02
PPARGC1B-203ENST00000394320 A0A0G2JND7 137 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 COMTP21964 271 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 TRADDQ15628 312 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 ZNF720Q7Z2F6 126 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 HERVK_113P62684 666 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 BFSP2Q13515 415 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 KIF19Q2TAC6 998 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 TEDDM1Q5T9Z0 273 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 ATP8B4Q8TF62 1192 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 VTA1Q9NP79 307 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 PYGBP11216 843 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 DDR1Q08345 913 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 GOLGA7BQ2TAP0 167 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 ACCSLQ4AC99 568 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 CALML6Q8TD86 181 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 PIK3R2O00459 728 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 PPATQ06203 517 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 ZNF512Q96ME7 567 aaPredicted RBP15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 LRRC1Q9BTT6 524 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 DSEQ9UL01 958 aa15.15■□□□□ 0.02
PPARGC1B-203ENST00000394320 H7C4K7 107 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 WNT10BO00744 389 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ZNF197O14709 1029 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 PSTPIP1O43586 416 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 CCDC22O60826 627 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 F9P00740 461 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ST8SIA6P61647 398 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 MAPRE2Q15555 327 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 MKL1Q969V6 931 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 GTSE1Q9NYZ3 720 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.14■□□□□ 0.018e-6■■□□□ 11.6
PPARGC1B-203ENST00000394320 PCDHB7Q9Y5E2 793 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 PI4K2BG5E9Z4 385 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ITGB3P05106 788 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 FNTAP49354 379 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 MMGT1Q8N4V1 131 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 TSSK1BQ9BXA7 367 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ZMYM2Q9UBW7 1377 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 NFIBO00712 420 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 PRRG1O14668 218 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 HAUS5O94927 633 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 LSM8O95777 96 aaKnown RBP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 PON1P27169 355 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 RIBC1Q8N443 379 aaPredicted RBP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ROPN1BQ9BZX4 212 aaPredicted RBP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 ROPN1Q9HAT0 212 aaPredicted RBP15.14■□□□□ 0.01
PPARGC1B-203ENST00000394320 NAGPAQ9UK23 515 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms