RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.12
USP44-202ENST00000393091 TRAPPC3O43617 180 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 KIF4AO95239 1232 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 SOD2P04179 222 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 ITGB3P05106 788 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 TPM2P07951 284 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 TRIM49P0CI25 452 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 TRIM49CP0CI26 452 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 MTIF2P46199 727 aaKnown RBP14.27□□□□□ -0.12
USP44-202ENST00000393091 DSG1Q02413 1049 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 CETN1Q12798 172 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 SEMA4DQ92854 862 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 ZBP1Q9H171 429 aa14.27□□□□□ -0.12
USP44-202ENST00000393091 ASPAP45381 313 aa14.27□□□□□ -0.13
USP44-202ENST00000393091 COL19A1Q14993 1142 aa14.27□□□□□ -0.13
USP44-202ENST00000393091 MEA1Q16626 185 aa14.27□□□□□ -0.13
USP44-202ENST00000393091 GBP6Q6ZN66 633 aa14.27□□□□□ -0.13
USP44-202ENST00000393091 C11orf84Q9BUA3 381 aaPredicted RBP14.27□□□□□ -0.13
USP44-202ENST00000393091 KPNA7A9QM74 516 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 GOLGA6L19H0YKK7 550 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 ATP1A3P13637 1013 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 TBXAS1P24557 533 aaPredicted RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 PON1P27169 355 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 CDC25BP30305 580 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 ALDH7A1P49419 539 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 TFAMQ00059 246 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 FANCCQ00597 558 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 KIAA0319Q5VV43 1072 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 PIK3R5Q8WYR1 880 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 CCDC127Q96BQ5 260 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 SPTLC1O15269 473 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 ARHGEF15O94989 841 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 UPP2O95045 317 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 GCLMP48507 274 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 RNASELQ05823 741 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 HPDLQ96IR7 371 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 TTYH3Q9C0H2 523 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 GANQ9H2C0 597 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 GREB1Q4ZG55 1949 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 POU2F2P09086 479 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 UNC93AQ86WB7 457 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 SPPL3Q8TCT6 385 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 PAAF1Q9BRP4 392 aa14.26□□□□□ -0.13
USP44-202ENST00000393091 INTS2Q9H0H0 1204 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 APOBEC3GQ9HC16 384 aaKnown RBP14.26□□□□□ -0.13
USP44-202ENST00000393091 P4HA1P13674 534 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 DNAJB2P25686 324 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 ZNF132P52740 706 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 FUT10Q6P4F1 479 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 TIFAQ96CG3 184 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 MRFAP1L1Q96HT8 127 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 AGAP1Q9UPQ3 857 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 INPP5FQ9Y2H2 1132 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 PPEF2O14830 753 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 FGF18O76093 207 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 CA3P07451 260 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 CTSAP10619 480 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 RABGGTBP53611 331 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 MYL6P60660 151 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 SMARCB1Q12824 385 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 HDAC7Q8WUI4 952 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 RHOBTB2Q9BYZ6 727 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 NIF3L1Q9GZT8 377 aa14.25□□□□□ -0.13
USP44-202ENST00000393091 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP44-202ENST00000393091 ODC1P11926 461 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 PBX2P40425 430 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 PIK3CAP42336 1068 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 JAM2P57087 298 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 APPL2Q8NEU8 664 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 KBTBD7Q8WVZ9 684 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 CEP295NLQ96MC4 621 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 NKX2-4Q9H2Z4 354 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 DENND4AQ7Z401 1863 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 NOL4O94818 638 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 ITGB1P05556 798 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 ACO1P21399 889 aaKnown RBP14.24□□□□□ -0.13
USP44-202ENST00000393091 EXOC3L4Q17RC7 722 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 FILIP1LQ4L180 1135 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 DCAF17Q5H9S7 520 aaPredicted RBP14.24□□□□□ -0.13
USP44-202ENST00000393091 SCARA3Q6AZY7 606 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
USP44-202ENST00000393091 MTRRQ9UBK8 725 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 APEX2Q9UBZ4 518 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 CASTOR2A6NHX0 329 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 LPXNO60711 386 aa14.24□□□□□ -0.13
USP44-202ENST00000393091 LHX1P48742 406 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms