RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TMEM150BA6NC51 233 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 CXCL11O14625 94 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 BRAFP15056 766 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 TAF6P49848 677 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 AMHR2Q16671 573 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 CCDC38Q502W7 563 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 RAPGEF5Q92565 580 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 KLHL29Q96CT2 875 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 SPAG7O75391 227 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 NDUFAF2Q8N183 169 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 LRGUKQ96M69 825 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
SCN3B-202ENST00000392770 EHD2Q9NZN4 543 aa17.46■□□□□ 0.39
SCN3B-202ENST00000392770 A0A0G2JND7 137 aa17.46■□□□□ 0.38
SCN3B-202ENST00000392770 F8VZ95 297 aa17.46■□□□□ 0.38
SCN3B-202ENST00000392770 PPARGP37231 505 aaPredicted RBP17.46■□□□□ 0.38
SCN3B-202ENST00000392770 RAP1GAPP47736 663 aa17.46■□□□□ 0.38
SCN3B-202ENST00000392770 RNF219Q5W0B1 726 aaPredicted RBP17.46■□□□□ 0.38
SCN3B-202ENST00000392770 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.38
SCN3B-202ENST00000392770 RRAGCQ9HB90 399 aa17.46■□□□□ 0.38
SCN3B-202ENST00000392770 CYP11B1P15538 503 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ITIH2P19823 946 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 PNPLA4P41247 253 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 CASP2P42575 452 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 RARRES1P49788 294 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 KIZQ2M2Z5 673 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 KCNK18Q7Z418 384 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 TUBB6Q9BUF5 446 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 OSBPL8Q9BZF1 889 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ASCC2Q9H1I8 757 aaPredicted RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 EEF2KO00418 725 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ZBTB39O15060 712 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 CYP2C19P33261 490 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 SLC12A1Q13621 1099 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 UBQLN1Q9UMX0 589 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 FRMPD4Q14CM0 1322 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 THPOP40225 353 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 SLC26A2P50443 739 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 BYSLQ13895 437 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 VGLL4Q14135 290 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 IL17AQ16552 155 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 TRIM68Q6AZZ1 485 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 NOA1Q8NC60 698 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 TPX2Q9ULW0 747 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 FGRP09769 529 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 SLC8A1P32418 973 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 RBBP5Q15291 538 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 MMGT1Q8N4V1 131 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ARHGEF26Q96DR7 871 aa17.45■□□□□ 0.38
SCN3B-202ENST00000392770 DUSP9Q99956 384 aaKnown RBP17.45■□□□□ 0.38
SCN3B-202ENST00000392770 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 LRRC14Q15048 493 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 GTF3C4Q9UKN8 822 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 MX2P20592 715 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 VEPH1Q14D04 833 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 KCNMB3Q9NPA1 279 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 XPO7Q9UIA9 1087 aaKnown RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 HSD17B4P51659 736 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 DBN1Q16643 649 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 ZNF571Q7Z3V5 609 aaPredicted RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 WDR49Q8IV35 697 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 ACSF2Q96CM8 615 aaPredicted RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TRAF3IP3Q9Y228 551 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 CLGNO14967 610 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 DEUP1Q05D60 604 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 NSUN2Q08J23 767 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TRIM67Q6ZTA4 783 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TAS1R2Q8TE23 839 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TRIM55Q9BYV6 548 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 BFARQ9NZS9 450 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 FOXP2O15409 715 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 UPP2O95045 317 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 RNF180Q86T96 592 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 SLC47A2Q86VL8 602 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 SLC7A14Q8TBB6 771 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
SCN3B-202ENST00000392770 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
SCN3B-202ENST00000392770 COPS2P61201 443 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CDCA5Q96FF9 252 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ABCF3Q9NUQ8 709 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 GMNCA6NCL1 334 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 KITP10721 976 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CENPCQ03188 943 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 STAT4Q14765 748 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 SLC20A1Q8WUM9 679 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ANKRD7Q92527 254 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ZSWIM1Q9BR11 485 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 SPON2Q9BUD6 331 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CACYBPQ9HB71 228 aaKnown RBP17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ARHGAP20Q9P2F6 1191 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CAPN6Q9Y6Q1 641 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms