RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FAM192AQ9GZU8 254 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 RAVER2Q9HCJ3 691 aaKnown RBP20.68■□□□□ 0.9
SHANK1-203ENST00000391813 F8VZ95 297 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 TRAPPC3O43617 180 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 KRT75O95678 551 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 KCNMA1Q12791 1236 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 ARL13BQ3SXY8 428 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 IRGCQ6NXR0 463 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 LRFN2Q9ULH4 789 aa20.68■□□□□ 0.9
SHANK1-203ENST00000391813 ASB14A6NK59 587 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 HOXA13P31271 388 aaPredicted RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 CACNA2D1P54289 1103 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 PTK7Q13308 1070 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 COG2Q14746 738 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 TRADDQ15628 312 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 MDH1BQ5I0G3 518 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 TMTC4Q5T4D3 741 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 PRPF39Q86UA1 669 aaKnown RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 E2F7Q96AV8 911 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 MRPL1Q9BYD6 325 aaKnown RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 RGL1Q9NZL6 768 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 NYAP2Q9P242 653 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 AP4S1Q9Y587 144 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 TTI2Q6NXR4 508 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 APOL6Q9BWW8 343 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 VPS33BQ9H267 617 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 CPVLQ9H3G5 476 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 ETAA1Q9NY74 926 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 HEY2Q9UBP5 337 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 CES2O00748 559 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 KCNJ1P48048 391 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 PRAMEP78395 509 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
SHANK1-203ENST00000391813 EPS8L3Q8TE67 593 aaKnown RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 SNRNP27Q8WVK2 155 aaKnown RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 MAGED2Q9UNF1 606 aaPredicted RBP20.67■□□□□ 0.9
SHANK1-203ENST00000391813 SKAP2O75563 359 aaPredicted RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 ZCCHC18P0CG32 403 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 COPAP53621 1224 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 EIF3EP60228 445 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 KRT76Q01546 638 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 TRMT5Q32P41 509 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 TKFCQ3LXA3 575 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 MEI1Q5TIA1 1274 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 C7orf31Q8N865 590 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 FRMD8Q9BZ67 464 aaPredicted RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 WHRNQ9P202 907 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 ATP11BQ9Y2G3 1177 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 FLT1P17948 1338 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 SDC4P31431 198 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 TTLL4Q14679 1199 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 MTERF2Q49AM1 385 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 SCARA5Q6ZMJ2 495 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 KCTD17Q8N5Z5 321 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 TTC8Q8TAM2 541 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 FBXO25Q8TCJ0 367 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 NCLNQ969V3 563 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 AKR1B1P15121 316 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 GEMIN4P57678 1058 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 C3orf62Q6ZUJ4 267 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 PRUNE1Q86TP1 453 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 CATSPER2Q96P56 530 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 PCSK1NQ9UHG2 260 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 P4HBP07237 508 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 NT5DC1Q5TFE4 455 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 PARK7Q99497 189 aaKnown RBP20.66■□□□□ 0.9
SHANK1-203ENST00000391813 CHMP2BQ9UQN3 213 aa20.66■□□□□ 0.9
SHANK1-203ENST00000391813 A0A0A6YYK5 440 aaPredicted RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 SPDYCQ5MJ68 293 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 OLFML3Q9NRN5 406 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 MARCOQ9UEW3 520 aaPredicted RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ZC3H7BQ9UGR2 993 aaKnown RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 CDY2AQ9Y6F7 541 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 CDY1Q9Y6F8 540 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 P4HA2O15460 535 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 TAF1CQ15572 869 aaPredicted RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ARMCX2Q7L311 632 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 CDR2LQ86X02 465 aaPredicted RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ANKRD13AQ8IZ07 590 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ZSWIM1Q9BR11 485 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 RPF1Q9H9Y2 349 aaKnown RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ENO3P13929 434 aaPredicted RBP20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ATP6V1B1P15313 513 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 ZNF394Q53GI3 561 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 KCNV1Q6PIU1 500 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 OR9Q1Q8NGQ5 310 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 GRID1Q9ULK0 1009 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 GPR75-ASB3A0A0A6YYF3 556 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 PMLP29590 882 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 CD302Q8IX05 232 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 TMCO5AQ8N6Q1 288 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 JADE3Q92613 823 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 PGM2Q96G03 612 aa20.65■□□□□ 0.9
SHANK1-203ENST00000391813 MMP19Q99542 508 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms