RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CLCN4P51793 760 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 MRPS5P82675 430 aaKnown RBP16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 FKBP3Q00688 224 aaKnown RBP16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 VARS2Q5ST30 1063 aaKnown RBP16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 KLHL10Q6JEL2 608 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 ELMSAN1Q6PJG2 1045 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 INTS8Q75QN2 995 aaKnown RBP16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 FAM186BQ8IYM0 893 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 VN1R2Q8NFZ6 395 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 GPT2Q8TD30 523 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 SLC22A17Q8WUG5 538 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 MKNK1Q9BUB5 465 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 DZANK1Q9NVP4 752 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 DPP7Q9UHL4 492 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 BACE2Q9Y5Z0 518 aa16.22■□□□□ 0.19
IGHV3-53-201ENST00000390627 H3BQ06 376 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 AKAP3O75969 853 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 CD44P16070 742 aaKnown RBP16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 TYMPP19971 482 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 LTBRP36941 435 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 YWHAHQ04917 246 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 ENPEPQ07075 957 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 PAK1Q13153 545 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 LEXMQ3ZCV2 418 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 ANKRD40Q6AI12 368 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 ZNF280DQ6N043 979 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 TRAPPC11Q7Z392 1133 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 NELFBQ8WX92 580 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 SENP8Q96LD8 212 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 OXCT2Q9BYC2 517 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 SIX4Q9UIU6 781 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 CD207Q9UJ71 328 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 DSEQ9UL01 958 aa16.21■□□□□ 0.19
IGHV3-53-201ENST00000390627 BRWD1Q9NSI6 2320 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 TRIM49BA6NDI0 452 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 PPP1R3GB7ZBB8 358 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 SPTLC1O15269 473 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 EPCAMP16422 314 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 HOXB8P17481 243 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 VAMP7P51809 220 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 PMS1P54277 932 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CLDN10P78369 228 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 RBM10P98175 930 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 TFF2Q03403 129 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 DLX2Q07687 328 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 BFSP1Q12934 665 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 MRPL58Q14197 206 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 PUS10Q3MIT2 529 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 GLYCTKQ8IVS8 523 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 ZC3H3Q8IXZ2 948 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CXorf38Q8TB03 319 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 PLEKHO2Q8TD55 490 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 MSLNLQ96KJ4 702 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 FAM84AQ96KN4 292 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 POP1Q99575 1024 aaKnown RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CLSTN3Q9BQT9 956 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CLEC1BQ9P126 229 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 CTNND2Q9UQB3 1225 aa16.2■□□□□ 0.18
IGHV3-53-201ENST00000390627 SCN1AP35498 2009 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 CYB561D2O14569 222 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 IKBKBO14920 756 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 PHACTR2O75167 634 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 CYP11A1P05108 521 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 BIRC3Q13489 604 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 TRPC3Q13507 836 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 RAB33AQ14088 237 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 SLC8B1Q6J4K2 584 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 TTI2Q6NXR4 508 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 METTL23Q86XA0 190 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 PALB2Q86YC2 1186 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 MLKLQ8NB16 471 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 HDAC7Q8WUI4 952 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 CEP63Q96MT8 703 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 ASB2Q96Q27 587 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 TIMM13Q9Y5L4 95 aaPredicted RBP16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 CDY1Q9Y6F8 540 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 SPTBN5Q9NRC6 3674 aaKnown RBP16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 PRUNE2Q8WUY3 3088 aa16.19■□□□□ 0.18
IGHV3-53-201ENST00000390627 TGM5O43548 720 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 OAZ2O95190 189 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 OR1D2P34982 312 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 CLUL1Q15846 466 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 OVOS1Q6IE37 1185 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 SMRP1Q8NCR6 262 aa16.18■□□□□ 0.18
IGHV3-53-201ENST00000390627 ZNF516Q92618 1163 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms