RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TYMPP19971 482 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 MCM4P33991 863 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 NDUFA8P51970 172 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 SNRPFP62306 86 aaKnown RBP12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 NUCB2P80303 420 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 C12orf56Q8IXR9 622 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 CEP57L1Q8IYX8 460 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 EDAQ92838 391 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 SAAL1Q96ER3 474 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 DPP3Q9NY33 737 aa12.34□□□□□ -0.43
IGHV4-28-201ENST00000390612 GOLGA8IPA6NC78 632 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 GOLGA8JA6NMD2 632 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 CYP11A1P05108 521 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 C8AP07357 584 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 ATF2P15336 505 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 SYKP43405 635 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 ZXDAP98168 799 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 TPGS2Q68CL5 300 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 CCDC149Q6ZUS6 474 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 TCEAL8Q8IYN2 117 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 GOLPH3LQ9H4A5 285 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 PCIF1Q9H4Z3 704 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 MAFFQ9ULX9 164 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 CLUHO75153 1309 aa12.33□□□□□ -0.44
IGHV4-28-201ENST00000390612 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SEC24AO95486 1093 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 VNN2O95498 520 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 STK4Q13043 487 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 PSMD2Q13200 908 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 CTXN3Q4LDR2 81 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 LIN9Q5TKA1 542 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 ZNF280DQ6N043 979 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 CBWD2Q8IUF1 395 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 C1orf127Q8N9H9 656 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 FSIP1Q8NA03 581 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 KIAA0895Q8NCT3 520 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SLC7A14Q8TBB6 771 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 MYADMQ96S97 322 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 KIAA1586Q9HCI6 787 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 PDE11AQ9HCR9 933 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SLC39A2Q9NP94 309 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 CGNQ9P2M7 1197 aaKnown RBP12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 EPS15L1Q9UBC2 864 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 LIMD1Q9UGP4 676 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 SIX4Q9UIU6 781 aa12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
IGHV4-28-201ENST00000390612 F5P12259 2224 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 PTPRDP23468 1912 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 FAM86C2PA6NEL3 165 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 OR6C75A6NL08 312 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 ZNF202O95125 648 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 YWHAHQ04917 246 aaPredicted RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 DPYDQ12882 1025 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 KNOP1Q1ED39 458 aaKnown RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 KRBA2Q6ZNG9 492 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 TRIM67Q6ZTA4 783 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 AFF4Q9UHB7 1163 aaKnown RBP12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 PTPRJQ12913 1337 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 GREB1Q4ZG55 1949 aa12.31□□□□□ -0.44
IGHV4-28-201ENST00000390612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 CCL16O15467 120 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 XYLBO75191 536 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 RHOBTB3O94955 611 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 ODC1P11926 461 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 TAF6P49848 677 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 NTHL1P78549 312 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 GPR17Q13304 367 aa12.3□□□□□ -0.44
IGHV4-28-201ENST00000390612 SURF1Q15526 300 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms