RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PODXLO00592 558 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 MICAL2O94851 1124 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
SOD1-202ENST00000389995 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
SOD1-202ENST00000389995 ZNF806P0C7X5 589 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 PSMA5P28066 241 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 CTHP32929 405 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 CTXN3Q4LDR2 81 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 WDR5BQ86VZ2 330 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 C18orf25Q96B23 403 aaPredicted RBP12.96□□□□□ -0.33
SOD1-202ENST00000389995 UROC1Q96N76 676 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 TRPV4Q9HBA0 871 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
SOD1-202ENST00000389995 BPTFQ12830 3046 aa12.96□□□□□ -0.34
SOD1-202ENST00000389995 TCHHQ07283 1943 aa12.96□□□□□ -0.34
SOD1-202ENST00000389995 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.34
SOD1-202ENST00000389995 MED24O75448 989 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 EPN2O95208 641 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 OR4Q2P0C623 313 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 CDR1P51861 262 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 TNK2Q07912 1038 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 SCRN1Q12765 414 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 FOXC1Q12948 553 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
SOD1-202ENST00000389995 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 ATF7IP2Q5U623 682 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 MCPH1Q8NEM0 835 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
SOD1-202ENST00000389995 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 NAP1L4Q99733 375 aaKnown RBP12.95□□□□□ -0.34
SOD1-202ENST00000389995 LSM14BQ9BX40 385 aaKnown RBP12.95□□□□□ -0.34
SOD1-202ENST00000389995 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 PCNX2A6NKB5 2137 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
SOD1-202ENST00000389995 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CHADO15335 359 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 VNN2O95498 520 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CCDC192P0DO97 292 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CPB1P15086 417 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 RAP1GAPP47736 663 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 FOSBP53539 338 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 EPHA5P54756 1037 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CCINQ13939 588 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 DGKKQ5KSL6 1271 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CPLX2Q6PUV4 134 aaKnown RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 ALKAL1Q6UXT8 129 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 CACNA2D4Q7Z3S7 1137 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 ARID3BQ8IVW6 561 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 GAB3Q8WWW8 586 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 LRRC3Q9BY71 257 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 YIPF1Q9Y548 306 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 NUB1Q9Y5A7 615 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 TIMM13Q9Y5L4 95 aaPredicted RBP12.94□□□□□ -0.34
SOD1-202ENST00000389995 PTPRDP23468 1912 aa12.94□□□□□ -0.34
SOD1-202ENST00000389995 H7C4K7 107 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 SOAT2O75908 522 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.341e-9■□□□□ 10.5
SOD1-202ENST00000389995 MPLP40238 635 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 NAMPTP43490 491 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 FCHO2Q0JRZ9 810 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 RNF43Q68DV7 783 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
SOD1-202ENST00000389995 TMC8Q8IU68 726 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 DDX12PQ92771 950 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 MKNK1Q9BUB5 465 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
SOD1-202ENST00000389995 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 CDT1Q9H211 546 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 AFF4Q9UHB7 1163 aaKnown RBP12.93□□□□□ -0.34
SOD1-202ENST00000389995 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 CEP192Q8TEP8 1941 aa12.93□□□□□ -0.34
SOD1-202ENST00000389995 TSC2P49815 1807 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 SYN3O14994 580 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 DCLK1O15075 740 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 NEMFO60524 1076 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 PRAMEF12O95522 483 aa12.92□□□□□ -0.34
SOD1-202ENST00000389995 HARSP12081 509 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms