RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SLC7A5Q01650 507 aa26.87■■□□□ 1.89
SHOX2-201ENST00000389589 TMEM132DQ14C87 1099 aa26.87■■□□□ 1.89
SHOX2-201ENST00000389589 DCAF12L1Q5VU92 463 aa26.87■■□□□ 1.89
SHOX2-201ENST00000389589 IFT20Q8IY31 132 aa26.87■■□□□ 1.89
SHOX2-201ENST00000389589 RNPC3Q96LT9 517 aaKnown RBP26.87■■□□□ 1.89
SHOX2-201ENST00000389589 CCDC66A2RUB6 948 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 CA12O43570 354 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 LSM8O95777 96 aaKnown RBP26.86■■□□□ 1.89
SHOX2-201ENST00000389589 C1QBPQ07021 282 aaKnown RBP26.86■■□□□ 1.89
SHOX2-201ENST00000389589 CD101Q93033 1021 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 BCO2Q9BYV7 579 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 VRTNQ9H8Y1 702 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 ADAM22Q9P0K1 906 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 TRIP11Q15643 1979 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 SPOPO43791 374 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 AKR1A1P14550 325 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 CTNNA2P26232 953 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 PLA2G4AP47712 749 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 CATSPER4Q7RTX7 472 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 ALG3Q92685 438 aa26.86■■□□□ 1.89
SHOX2-201ENST00000389589 FGGP02679 453 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 ITGB3P05106 788 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 WEE2P0C1S8 567 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 RRM1P23921 792 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 CASP8Q14790 479 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 PPP2R5EQ16537 467 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 PASD1Q8IV76 773 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 MRPL47Q9HD33 250 aaKnown RBP26.85■■□□□ 1.89
SHOX2-201ENST00000389589 NXF1Q9UBU9 619 aaKnown RBP26.85■■□□□ 1.89
SHOX2-201ENST00000389589 ANAPC7Q9UJX3 599 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 ITGA11Q9UKX5 1188 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 CFHP08603 1231 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 P4HA1P13674 534 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 CTNNA1P35221 906 aaKnown RBP26.85■■□□□ 1.89
SHOX2-201ENST00000389589 PEX5P50542 639 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 TMEM62Q0P6H9 643 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 FSCN1Q16658 493 aaKnown RBP26.85■■□□□ 1.89
SHOX2-201ENST00000389589 SLC27A1Q6PCB7 646 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 SCARA5Q6ZMJ2 495 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 KLHL7Q8IXQ5 586 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 CXorf38Q8TB03 319 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 HHIPL1Q96JK4 782 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 AP1M1Q9BXS5 423 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 ZNF518BQ9C0D4 1074 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 SLITRK6Q9H5Y7 841 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 PLEKHA5Q9HAU0 1116 aa26.85■■□□□ 1.89
SHOX2-201ENST00000389589 ABT1Q9ULW3 272 aaKnown RBP26.85■■□□□ 1.89
SHOX2-201ENST00000389589 HEXIM1O94992 359 aaKnown RBP26.84■■□□□ 1.89
SHOX2-201ENST00000389589 DARSP14868 501 aaKnown RBP26.84■■□□□ 1.89
SHOX2-201ENST00000389589 WDR72Q3MJ13 1102 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 RUFY4Q6ZNE9 571 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 BTBD6Q96KE9 485 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 GDF3Q9NR23 364 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 PCDHGC3Q9UN70 934 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 GINS2Q9Y248 185 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 PCDHA3Q9Y5H8 950 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 SCINQ9Y6U3 715 aa26.84■■□□□ 1.89
SHOX2-201ENST00000389589 A0A0U1RQG5 324 aaPredicted RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 KPNA6O60684 536 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 GNAT1P11488 350 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 FGFR4P22455 802 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 AXLP30530 894 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 HOXA11P31270 313 aaPredicted RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 SLC1A1P43005 524 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 FCGRTP55899 365 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 BEX3Q00994 111 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 NOTUMQ6P988 496 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 AENQ8WTP8 325 aaKnown RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 KRT35Q92764 455 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 C11orf70Q9BRQ4 267 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 CYP3A43Q9HB55 503 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 POLIQ9UNA4 740 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 DERAQ9Y315 318 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 DUSP11O75319 330 aaKnown RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 NPTXRO95502 500 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 HSPA6P17066 643 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 IRX5P78411 483 aaPredicted RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 MRPS25P82663 173 aaKnown RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 TMEM35BQ8NCS4 154 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 OSMRQ99650 979 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 ACBD3Q9H3P7 528 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 FAM124BQ9H5Z6 455 aaPredicted RBP26.83■■□□□ 1.89
SHOX2-201ENST00000389589 VIPAS39Q9H9C1 493 aa26.83■■□□□ 1.89
SHOX2-201ENST00000389589 GOLGA6L10A0A0M3HER8 536 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 MYO1FO00160 1098 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 RAD51CO43502 376 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 STAU1O95793 577 aaKnown RBP26.82■■□□□ 1.88
SHOX2-201ENST00000389589 GLI1P08151 1106 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 MYBL2P10244 700 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 GPS2Q13227 327 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 SEL1L2Q5TEA6 688 aa26.82■■□□□ 1.88
SHOX2-201ENST00000389589 C17orf102A2RUQ5 167 aa26.81■■□□□ 1.88
SHOX2-201ENST00000389589 PAEPP09466 180 aa26.81■■□□□ 1.88
SHOX2-201ENST00000389589 EIF4BP23588 611 aaKnown RBP26.81■■□□□ 1.88
SHOX2-201ENST00000389589 BRD2P25440 801 aaKnown RBP26.81■■□□□ 1.88
SHOX2-201ENST00000389589 CTGFP29279 349 aa26.81■■□□□ 1.88
SHOX2-201ENST00000389589 EPHB4P54760 987 aa26.81■■□□□ 1.88
SHOX2-201ENST00000389589 RBP5P82980 135 aa26.81■■□□□ 1.88
SHOX2-201ENST00000389589 LACTBP83111 547 aaPredicted RBP26.81■■□□□ 1.88
SHOX2-201ENST00000389589 PTP4A2Q12974 167 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms