RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MCM4P33991 863 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 TXKP42681 527 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 EPHA5P54756 1037 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 GPR158Q5T848 1215 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 ZNF280DQ6N043 979 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 CPLX2Q6PUV4 134 aaKnown RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 GATA6Q92908 595 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 ZC3H10Q96K80 434 aaKnown RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 LRRC3BQ96PB8 259 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 KIFC3Q9BVG8 833 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 CCDC94Q9BW85 323 aaPredicted RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 DUSP15Q9H1R2 295 aaPredicted RBP10.58□□□□□ -0.72
IFT88-203ENST00000389373 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 YIPF1Q9Y548 306 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 GREB1Q4ZG55 1949 aa10.58□□□□□ -0.72
IFT88-203ENST00000389373 CCDC163A0A0D9SF12 145 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 HYAL3O43820 417 aaPredicted RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 OR4Q2P0C623 313 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 CEACAM1P13688 526 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 ALDH1A3P47895 512 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 EPHB3P54753 998 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 IRX6P78412 446 aaPredicted RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 GRSF1Q12849 480 aaKnown RBP eCLIP10.57□□□□□ -0.72
IFT88-203ENST00000389373 MRPL58Q14197 206 aaKnown RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 PTPAQ15257 358 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 CALCRLQ16602 461 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 ITPRIPL2Q3MIP1 535 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 ARHGAP15Q53QZ3 475 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 NT5DC1Q5TFE4 455 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 ATF7IP2Q5U623 682 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 CEP120Q8N960 986 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 APPL2Q8NEU8 664 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 BPIFB1Q8TDL5 484 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 DDX12PQ92771 950 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 AGXT2Q9BYV1 514 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 TTC12Q9H892 705 aaPredicted RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 TMEM9BQ9NQ34 198 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 GKN1Q9NS71 199 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 THG1LQ9NWX6 298 aaKnown RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 WASF3Q9UPY6 502 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
IFT88-203ENST00000389373 F5P12259 2224 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 SDK1Q7Z5N4 2213 aa10.57□□□□□ -0.72
IFT88-203ENST00000389373 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 BCLAF3A2AJT9 711 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 KHNYNO15037 678 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 RNF40O75150 1001 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 AKAP3O75969 853 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 ZIC2O95409 532 aaPredicted RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 HARSP12081 509 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 XBP1P17861 261 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 PSMA5P28066 241 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 GABRR2P28476 465 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 NAMPTP43490 491 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 DGKEP52429 567 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 DUSP4Q13115 394 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 PSMD2Q13200 908 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 PLD1Q13393 1074 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 FSTL4Q6MZW2 842 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 C19orf48Q6RUI8 117 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 SKAP1Q86WV1 359 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 TMC8Q8IU68 726 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 FBXL16Q8N461 479 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 CAMKK1Q8N5S9 505 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 C18orf25Q96B23 403 aaPredicted RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 IFT74Q96LB3 600 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 ZMAT2Q96NC0 199 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 TBC1D32Q96NH3 1257 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 LRRC3Q9BY71 257 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 SMG9Q9H0W8 520 aaKnown RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 TOPORSQ9NS56 1045 aaPredicted RBP10.56□□□□□ -0.72
IFT88-203ENST00000389373 SLC27A5Q9Y2P5 690 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 ATRXP46100 2492 aa10.56□□□□□ -0.72
IFT88-203ENST00000389373 PDCD11Q14690 1871 aaKnown RBP10.55□□□□□ -0.72
IFT88-203ENST00000389373 LNP1A1A4G5 178 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 ARHGEF35A5YM69 484 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 PATE3B3GLJ2 98 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 K7ERI5 159 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 SOAT2O75908 522 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 SEC24BO95487 1268 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 EGFP01133 1207 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.72
IFT88-203ENST00000389373 GRM5P41594 1212 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 CDR1P51861 262 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms