RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 TMEM206Q9H813 350 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 SFXN1Q9H9B4 322 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
APOBEC3F-202ENST00000381565 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PAPLNO95428 1278 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 POU5F1Q01860 360 aaKnown RBP12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 CREMQ03060 361 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 POSTNQ15063 836 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 KRBA2Q6ZNG9 492 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 CD302Q8IX05 232 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 FAM213AQ9BRX8 229 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 POMKQ9H5K3 350 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 ASB7Q9H672 318 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 DERAQ9Y315 318 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 C2CD2Q9Y426 696 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 PTPRJQ12913 1337 aa12.52□□□□□ -0.41
APOBEC3F-202ENST00000381565 DCHS1Q96JQ0 3298 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 ANO9A1A5B4 782 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 M0QZQ0 153 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 SYN3O14994 580 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 SPTLC1O15269 473 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 RFPL2O75678 378 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 ZNF202O95125 648 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 MCM4P33991 863 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 ITIH3Q06033 890 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 DPYDQ12882 1025 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 STK4Q13043 487 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 MRPL58Q14197 206 aaKnown RBP12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 TMC5Q6UXY8 1006 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 FMR1NBQ8N0W7 255 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 GPD1LQ8N335 351 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 TSPAN18Q96SJ8 248 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 PRRX2Q99811 253 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 AGPAT3Q9NRZ7 376 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 CDY1Q9Y6F8 540 aa12.51□□□□□ -0.41
APOBEC3F-202ENST00000381565 GREB1Q4ZG55 1949 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 PIRO00625 290 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 EXTL3O43909 919 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 IL18RAPO95256 599 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 C1RP00736 705 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 MYL1P05976 194 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 AVPR2P30518 371 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 SNW1Q13573 536 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 ANKS3Q6ZW76 656 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 GPR149Q86SP6 731 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 BEST2Q8NFU1 509 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 HDAC7Q8WUI4 952 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 ZNF707Q96C28 371 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 EXOC1Q9NV70 894 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 BACE2Q9Y5Z0 518 aa12.5□□□□□ -0.41
APOBEC3F-202ENST00000381565 WDR27A2RRH5 827 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 CLIC2O15247 247 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 GFRA3O60609 400 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 LDHAP00338 332 aaKnown RBP12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 OR1D2P34982 312 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 MTHFRP42898 656 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 LILRA4P59901 499 aa12.49□□□□□ -0.41
APOBEC3F-202ENST00000381565 ROR1Q01973 937 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms