RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 GDPD5Q8WTR4 605 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 MAML3Q96JK9 1138 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 GCNAQ96QF7 691 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 MAK16Q9BXY0 300 aaKnown RBP20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 TIMMDC1Q9NPL8 285 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 SERPINA10Q9UK55 444 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 RICTORQ6R327 1708 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 CYP26A1O43174 497 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 ARL4CP56559 192 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 SLC5A5Q92911 643 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 DYNLL2Q96FJ2 89 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 OXNAD1Q96HP4 312 aaPredicted RBP20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 DCP1AQ9NPI6 582 aaPredicted RBP20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 PCDHA12Q9UN75 941 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 SPECC1L-ADORA2AF8WAN1 911 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 STRNO43815 780 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 HOXA7P31268 230 aaPredicted RBP20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 RAP1GDS1P52306 607 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 EPHB1P54762 984 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 PCNX4Q63HM2 1172 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 TMEM110Q86TL2 294 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 SFR1Q86XK3 245 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ZFP28Q8NHY6 868 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 AGPAT1Q99943 283 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 CRNKL1Q9BZJ0 848 aaKnown RBP20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ANKRD2Q9GZV1 360 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 RANBP17Q9H2T7 1088 aaKnown RBP20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 IL17RBQ9NRM6 502 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 MARF1Q9Y4F3 1742 aaKnown RBP20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 TMEM247A6NEH6 219 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 PCSK6P29122 969 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 NANOGNBQ7Z5D8 188 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ICA1LQ8NDH6 482 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 GRK7Q8WTQ7 553 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 TTC17Q96AE7 1141 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 MRPL1Q9BYD6 325 aaKnown RBP20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ACP6Q9NPH0 428 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 PCDHA2Q9Y5H9 948 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ATP8B3O60423 1300 aa20.03■□□□□ 0.8
SMARCD1-201ENST00000381513 ARHGAP10A1A4S6 786 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 MAGEC1O60732 1142 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 GCNT3O95395 438 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 IVDP26440 423 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 PHEXP78562 749 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 TMEM53Q6P2H8 277 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 IYDQ6PHW0 289 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 TCP10LQ8TDR4 215 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 FAM81BQ96LP2 452 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 PRICKLE1Q96MT3 831 aaPredicted RBP20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 PIGSQ96S52 555 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 ORAI2Q96SN7 254 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 SENP1Q9P0U3 644 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 APPL1Q9UKG1 709 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 FOXN3O00409 490 aaPredicted RBP20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 FGRP09769 529 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 USP17L8P0C7I0 530 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 EMP3P54852 163 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 NAA20P61599 178 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 PLCB3Q01970 1234 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 USP17L2Q6R6M4 530 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 PATL1Q86TB9 770 aaKnown RBP20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 FNDC8Q8TC99 324 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 DIS3LQ8TF46 1054 aaKnown RBP20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 LZTS1Q9Y250 596 aa20.02■□□□□ 0.8
SMARCD1-201ENST00000381513 FAM237BA0A1B0GVD1 139 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 TRPA1O75762 1119 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 TRIM49P0CI25 452 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 TRIM49CP0CI26 452 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 ANKRD20A4Q4UJ75 823 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 RABGAP1LQ5R372 815 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 LRRC43Q8N309 656 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 ZNF564Q8TBZ8 553 aaPredicted RBP20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 NUP85Q9BW27 656 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.02■□□□□ 0.793e-6■■□□□ 12.2
SMARCD1-201ENST00000381513 NEU2Q9Y3R4 380 aa20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 SIPA1L3O60292 1781 aaPredicted RBP20.02■□□□□ 0.79
SMARCD1-201ENST00000381513 MEI4A8MW99 385 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 BUD23O43709 281 aaKnown RBP20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 TM7SF2O76062 418 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 COA7Q96BR5 231 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 POLR3CQ9BUI4 534 aaPredicted RBP20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 LSM1O15116 133 aaKnown RBP20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 TRMUO75648 421 aaKnown RBP20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 TFAP2AP05549 437 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 FOLH1Q04609 750 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 PTK6Q13882 451 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 FAM186BQ8IYM0 893 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 RDH13Q8NBN7 331 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 RAB3IL1Q8TBN0 382 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 SKA1Q96BD8 255 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 IKZF4Q9H2S9 585 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 SLC17A7Q9P2U7 560 aa20.01■□□□□ 0.79
SMARCD1-201ENST00000381513 FKBP6O75344 327 aa20■□□□□ 0.79
SMARCD1-201ENST00000381513 LPIN1Q14693 890 aa20■□□□□ 0.79
SMARCD1-201ENST00000381513 FASTKD3Q14CZ7 662 aaKnown RBP20■□□□□ 0.79
SMARCD1-201ENST00000381513 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
SMARCD1-201ENST00000381513 CLEC4GQ6UXB4 293 aa20■□□□□ 0.79
SMARCD1-201ENST00000381513 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms