RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 RNF43Q68DV7 783 aa19.03■□□□□ 0.64
HMGN1-203ENST00000380748 CPLX2Q6PUV4 134 aaKnown RBP19.03■□□□□ 0.64
HMGN1-203ENST00000380748 CEP120Q8N960 986 aa19.03■□□□□ 0.64
HMGN1-203ENST00000380748 DEPTORQ8TB45 409 aa19.03■□□□□ 0.64
HMGN1-203ENST00000380748 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-203ENST00000380748 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
HMGN1-203ENST00000380748 TMEM121BQ9BXQ6 578 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-203ENST00000380748 GPR88Q9GZN0 384 aa19.03■□□□□ 0.64
HMGN1-203ENST00000380748 NBEAQ8NFP9 2946 aa19.03■□□□□ 0.64
HMGN1-203ENST00000380748 EML5Q05BV3 1969 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 SPATA31C1P0DKV0 1188 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 XRCC6P12956 609 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGN1-203ENST00000380748 NAMPTP43490 491 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 ATF7IP2Q5U623 682 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 RNF19BQ6ZMZ0 732 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 TMC8Q8IU68 726 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 ARID3BQ8IVW6 561 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-203ENST00000380748 ZMAT2Q96NC0 199 aaKnown RBP19.02■□□□□ 0.64
HMGN1-203ENST00000380748 LRRC3Q9BY71 257 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 WASF3Q9UPY6 502 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 YIPF1Q9Y548 306 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 PCDHGA5Q9Y5G8 931 aa19.02■□□□□ 0.64
HMGN1-203ENST00000380748 KIF26AQ9ULI4 1882 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-203ENST00000380748 DMXL2Q8TDJ6 3036 aa19.02■□□□□ 0.63
HMGN1-203ENST00000380748 TXKP42681 527 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 OSTNP61366 133 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 TNK2Q07912 1038 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 NR5A1Q13285 461 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 ZNF280DQ6N043 979 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 ALKAL1Q6UXT8 129 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 RUFY3Q7L099 469 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 SYNPOQ8N3V7 929 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 EDEM2Q9BV94 578 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 DNAJC25Q9H1X3 360 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 VPS45Q9NRW7 570 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 NUB1Q9Y5A7 615 aa19.01■□□□□ 0.63
HMGN1-203ENST00000380748 WNT7AO00755 349 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 VNN2O95498 520 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
HMGN1-203ENST00000380748 CPB1P15086 417 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 ZNF252P-AS1Q0IIN9 211 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 TNFRSF25Q93038 417 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 C18orf25Q96B23 403 aaPredicted RBP19■□□□□ 0.63
HMGN1-203ENST00000380748 SUSD3Q96L08 255 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 MKNK1Q9BUB5 465 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 POLD4Q9HCU8 107 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 SLC38A7Q9NVC3 462 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 POLR3BQ9NW08 1133 aaPredicted RBP19■□□□□ 0.63
HMGN1-203ENST00000380748 MAFFQ9ULX9 164 aa19■□□□□ 0.63
HMGN1-203ENST00000380748 CCDC163A0A0D9SF12 145 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 MED24O75448 989 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 XBP1P17861 261 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 GRM5P41594 1212 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 YARSP54577 528 aaKnown RBP18.99■□□□□ 0.63
HMGN1-203ENST00000380748 PLK5Q496M5 336 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 ARHGAP29Q52LW3 1261 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 PADI6Q6TGC4 694 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 CATSPER3Q86XQ3 398 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 DDX12PQ92771 950 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 ZC3H10Q96K80 434 aaKnown RBP18.99■□□□□ 0.63
HMGN1-203ENST00000380748 PGLYRP2Q96PD5 576 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 CCDC94Q9BW85 323 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-203ENST00000380748 CDT1Q9H211 546 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 CRISPLD1Q9H336 500 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 ZSWIM6Q9HCJ5 1215 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 TOPORSQ9NS56 1045 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-203ENST00000380748 ATG2BQ96BY7 2078 aa18.99■□□□□ 0.63
HMGN1-203ENST00000380748 NUP210Q8TEM1 1887 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-203ENST00000380748 SRRM3A6NNA2 597 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-203ENST00000380748 C4orf47A7E2U8 309 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 DPYSL4O14531 572 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 NEMFO60524 1076 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 OR4Q2P0C623 313 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 CYP11B2P19099 503 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 MCM4P33991 863 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-203ENST00000380748 HAUS6Q7Z4H7 955 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 BEST2Q8NFU1 509 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 TBC1D32Q96NH3 1257 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 MTMR9Q96QG7 549 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 SLC8A2Q9UPR5 921 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 TNFSF13BQ9Y275 285 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 ITPR1Q14643 2758 aa18.98■□□□□ 0.63
HMGN1-203ENST00000380748 AKAP3O75969 853 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 PRAMEF12O95522 483 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 EFNA5P52803 228 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 SCRN1Q12765 414 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 SH3PXD2AQ5TCZ1 1133 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 GAREM2Q75VX8 874 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 APBB1IPQ7Z5R6 666 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-203ENST00000380748 APPL2Q8NEU8 664 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 GATA6Q92908 595 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 TMEM209Q96SK2 561 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 DUSP15Q9H1R2 295 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-203ENST00000380748 TUFT1Q9NNX1 390 aa18.97■□□□□ 0.63
HMGN1-203ENST00000380748 ARHGEF35A5YM69 484 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms