RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 DCLK3Q9C098 648 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 BRD8Q9H0E9 1235 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 WWP1Q9H0M0 922 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PKD2L2Q9NZM6 624 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TPX2Q9ULW0 747 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 MYO3AQ8NEV4 1616 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 FAM205AQ6ZU69 1335 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 UBA6A0AVT1 1052 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 C5orf58C9J3I9 102 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 DFFAO00273 331 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 VDRP11473 427 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 KCNA2P16389 499 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ITIH2P19823 946 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 NNTQ13423 1086 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PDAP1Q13442 181 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CAPRIN1Q14444 709 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 IL31Q6EBC2 164 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ZNF410Q86VK4 478 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 UNC45BQ8IWX7 931 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 RIBC1Q8N443 379 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CASS4Q9NQ75 786 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 A0A1W2PQJ5 194 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 RASA4BC9J798 803 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 SLC9A3R1O14745 358 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 RASA4O43374 803 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 GPD1P21695 349 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CDH18Q13634 790 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 GLYCTKQ8IVS8 523 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TRIM48Q8IWZ4 208 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 YME1L1Q96TA2 773 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PITPNM3Q9BZ71 974 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ABHD16BQ9H3Z7 469 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 GOLPH3LQ9H4A5 285 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TUBE1Q9UJT0 475 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CAPN7Q9Y6W3 813 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 F5H5T6 163 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 NCAM2O15394 837 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 FAM107AO95990 144 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 LCP1P13796 627 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 SLC45A4Q5BKX6 768 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CNPY3Q9BT09 278 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ARHGEF38Q9NXL2 777 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PCSK1NQ9UHG2 260 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CEMIPQ8WUJ3 1361 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PRPF4O43172 522 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PARNO95453 639 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 OCM2P0CE71 109 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 OCMP0CE72 109 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 STIP1P31948 543 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TCF7P36402 384 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 THPOP40225 353 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 HADHAP40939 763 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 HIF1AQ16665 826 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PCNX4Q63HM2 1172 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 MPZL3Q6UWV2 235 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ACRBPQ8NEB7 543 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 C1QTNF7Q9BXJ2 289 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ZCCHC2Q9C0B9 1178 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 JMJD4Q9H9V9 463 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 KCNH7Q9NS40 1196 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 SNX5Q9Y5X3 404 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CAND2O75155 1236 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 SPAG7O75391 227 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 GYS1P13807 737 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 MAPK1P28482 360 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 IFNAR2P48551 515 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 ADCY1Q08828 1119 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 ZBTB17Q13105 803 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 C16orf72Q14CZ0 275 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 PDK2Q15119 407 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 PKN3Q6P5Z2 889 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 APBB2Q92870 758 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 EXT2Q93063 718 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 CCDC126Q96EE4 140 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 HPDLQ96IR7 371 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 AIFM3Q96NN9 605 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 CLCA2Q9UQC9 943 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 CEP170BQ9Y4F5 1589 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 SRGNP10124 158 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 HOXB8P17481 243 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 DNAJB2P25686 324 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 GPS1Q13098 491 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 EPM2AIP1Q7L775 607 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 SHCBP1Q8NEM2 672 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 RNF25Q96BH1 459 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 NAF1Q96HR8 494 aaKnown RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 FBXO44Q9H4M3 255 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 COG4Q9H9E3 785 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 HMX1Q9NP08 348 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-201ENST00000380701 ENTPD7Q9NQZ7 604 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 MPP6Q9NZW5 540 aa7.51□□□□□ -1.21
CCDC171-201ENST00000380701 MROH7Q68CQ1 1323 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms