RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 VPS54Q9P1Q0 977 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 A0A1W2PQC6 194 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 LGALS16A8MUM7 142 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 CCDC58Q4VC31 144 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 TAF1BQ53T94 588 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF746Q6NUN9 644 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ERI1Q8IV48 349 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 LZTR1Q8N653 840 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SPATA20Q8TB22 786 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ESR2Q92731 530 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 PEX13Q92968 403 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 CDK5RAP3Q96JB5 506 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 PABPC3Q9H361 631 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 DNAJC17Q9NVM6 304 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 GPRC5DQ9NZD1 345 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ATPIF1Q9UII2 106 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ZFP69BQ9UJL9 534 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 POU2F3Q9UKI9 436 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 KLRF2D3W0D1 207 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SH2B2O14492 632 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 RASGRF2O14827 1237 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 PALMO75781 387 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 AMPD1P23109 780 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 GUCY1A2P33402 732 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 KRT81Q14533 505 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 TMEM67Q5HYA8 995 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 EGFLAMQ63HQ2 1017 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 INTS5Q6P9B9 1019 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 CROCCP2Q86T23 111 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 DTX3Q8N9I9 347 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 COPRSQ9NQ92 184 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 LRRC4BQ9NT99 713 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SACM1LQ9NTJ5 587 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 TMCC3Q9ULS5 477 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SPEF1Q9Y4P9 236 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SNTNA6NMZ2 147 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 A8MU76 341 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 KCNK3O14649 394 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 GSC2O15499 205 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 ONECUT3O60422 494 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 VCLP18206 1134 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 DLG1Q12959 904 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 PAK1Q13153 545 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 LRRC24Q50LG9 513 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 OGFOD2Q6N063 350 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 TMC7Q7Z402 723 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 C2CD5Q86YS7 1000 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 ENAHQ8N8S7 591 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 HPS1Q92902 700 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 FAR2Q96K12 515 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 ZFRQ96KR1 1074 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 BTBD10Q9BSF8 475 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 HAUS8Q9BT25 410 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 SENP6Q9GZR1 1112 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 PUS7LQ9H0K6 701 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 GPR108Q9NPR9 543 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 STXBP5LQ9Y2K9 1186 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 ARPC4-TTLL3A0A0A6YYG9 625 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 GH1P01241 217 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 PIM1P11309 404 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 EIF4A3P38919 411 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 AP2B1P63010 937 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 NIPAL4Q0D2K0 466 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 RAB3IL1Q8TBN0 382 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 UNKQ9C0B0 810 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 OLFML3Q9NRN5 406 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 SCINQ9Y6U3 715 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 BICDL2A1A5D9 508 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 CREB1P16220 341 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 CCNCP24863 283 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 SLC5A3P53794 718 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 C21orf59P57076 290 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 DSTNP60981 165 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 HNRNPDQ14103 355 aaKnown RBP9.86□□□□□ -0.83
PTPRA-204ENST00000380393 RAPH1Q70E73 1250 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 LILRB2Q8N423 598 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 CAPSLQ8WWF8 208 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 SGCDQ92629 289 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 DNAI2Q9GZS0 605 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 FANCEQ9HB96 536 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 IFT52Q9Y366 437 aa9.86□□□□□ -0.83
PTPRA-204ENST00000380393 MYH4Q9Y623 1939 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 GOLGA8JA6NMD2 632 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 SOBPA7XYQ1 873 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 A8MX80 341 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 GNPATO15228 680 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 HNRNPCL1O60812 293 aaKnown RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 IDH1O75874 414 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms