RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MOGSQ13724 837 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TAF1BQ53T94 588 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 POTEAQ6S8J7 498 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 BTNL9Q6UXG8 535 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TUBA1AQ71U36 451 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 MYO1HQ8N1T3 1032 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 GOLM1Q8NBJ4 401 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PNMA1Q8ND90 353 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ACTRT1Q8TDG2 376 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TUBGCP2Q9BSJ2 902 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PITPNM3Q9BZ71 974 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 CLEC11AQ9Y240 323 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 COL11A2P13942 1736 aaPredicted RBP7.9□□□□□ -1.15
CDKL5-201ENST00000379989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.9□□□□□ -1.15
CDKL5-201ENST00000379989 CFAP69A5D8W1 941 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 BTBD18B2RXH4 712 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 RASGRF2O14827 1237 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 DCTN3O75935 186 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 TCEA1P23193 301 aaKnown RBP7.9□□□□□ -1.15
CDKL5-201ENST00000379989 KLRC1P26715 233 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 FOXN2P32314 431 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 SLC16A2P36021 539 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 BTDP43251 543 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 MXI1P50539 228 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 C16orf72Q14CZ0 275 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 FKBP1CQ5VVH2 108 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 MAGEB18Q96M61 343 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 ZDHHC15Q96MV8 337 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 IDI2Q9BXS1 227 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 SEMA4AQ9H3S1 761 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.15
CDKL5-201ENST00000379989 NOC2LQ9Y3T9 749 aaKnown RBP7.9□□□□□ -1.15
CDKL5-201ENST00000379989 ZNF646O15015 1829 aaPredicted RBP7.9□□□□□ -1.15
CDKL5-201ENST00000379989 FOXO6A8MYZ6 492 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 NDC80O14777 642 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 BUD23O43709 281 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 AP1G1O43747 822 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CHRNB1P11230 501 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 LMNB1P20700 586 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 PHBP35232 272 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 KLRC3Q07444 240 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ZBTB17Q13105 803 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 NAB2Q15742 525 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 MFSD14BQ5SR56 506 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ZNF658Q5TYW1 1059 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 MFSD5Q6N075 450 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 UGT2A3Q6UWM9 527 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 DCDC5Q6ZRR9 648 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 PTCD2Q8WV60 388 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 C2orf49Q9BVC5 232 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CCSER1Q9C0I3 900 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 C6orf50Q9HD87 102 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ZDHHC7Q9NXF8 308 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 BARHL2Q9NY43 387 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 UVRAGQ9P2Y5 699 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CNOT7Q9UIV1 285 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM114B3SHH9 223 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC188H7C350 402 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 KRIT1O00522 736 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ADCY6O43306 1168 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CYTH3O43739 400 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 CNOT3O75175 753 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TBCAO75347 108 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ENTPD3O75355 529 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 USP1O94782 785 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 SNHG28P0DPA3 235 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 GPC3P51654 580 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 RAB15P59190 212 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TFAP4Q01664 338 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 POU5F1Q01860 360 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 GABPAQ06546 454 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 DPP8Q6V1X1 898 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 RAPH1Q70E73 1250 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 PDSS2Q86YH6 399 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 REM2Q8IYK8 340 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 OR6Y1Q8NGX8 325 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 SYMPKQ92797 1274 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 GPATCH1Q9BRR8 931 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 BTBD10Q9BSF8 475 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 KIAA1257Q9ULG3 409 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TRAF3IP3Q9Y228 551 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 TACC3Q9Y6A5 838 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.89□□□□□ -1.15
CDKL5-201ENST00000379989 FLT1P17948 1338 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 ATRNL1Q5VV63 1379 aa7.89□□□□□ -1.15
CDKL5-201ENST00000379989 H0YIN7 160 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 NKRFO15226 690 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CLPTM1O96005 669 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 OCM2P0CE71 109 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 OCMP0CE72 109 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ZBTB48P10074 688 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RXRAP19793 462 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 STX2P32856 288 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CHN2P52757 468 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms