RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 PNPLA4P41247 253 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 BRCC3P46736 316 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 SGSM1Q2NKQ1 1148 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 SV2CQ496J9 727 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 EHBP1Q8NDI1 1231 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 COLEC11Q9BWP8 271 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 NKX2-4Q9H2Z4 354 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 GRPEL1Q9HAV7 217 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 APOBEC3GQ9HC16 384 aaKnown RBP26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 ADAM28Q9UKQ2 775 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 MTUS1Q9ULD2 1270 aa26.28■■□□□ 1.8
TM6SF1-204ENST00000379390 TMEM189-UBE2V1I3L0A0 370 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 ATICP31939 592 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 CTNNB1P35222 781 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 RAB30Q15771 203 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 WDR72Q3MJ13 1102 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 CCDC150Q8NCX0 1101 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 ERGIC2Q96RQ1 377 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 C17orf80Q9BSJ5 609 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 AAASQ9NRG9 546 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 NXF1Q9UBU9 619 aaKnown RBP26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 MSRAQ9UJ68 235 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 POLIQ9UNA4 740 aa26.27■■□□□ 1.8
TM6SF1-204ENST00000379390 KPNA7A9QM74 516 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 CBFA2T2O43439 604 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 GSE1Q14687 1217 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 TIGD5Q53EQ6 642 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 WDR44Q5JSH3 913 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 SCARA5Q6ZMJ2 495 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 SLC39A11Q8N1S5 342 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 TATDN2Q93075 761 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 LSM14BQ9BX40 385 aaKnown RBP26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 SIK3Q9Y2K2 1263 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 PCDHB12Q9Y5F1 795 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 SNX9Q9Y5X1 595 aa26.26■■□□□ 1.79
TM6SF1-204ENST00000379390 TADA2AO75478 443 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 TPM3P06753 285 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 ZNF667Q5HYK9 610 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 PRPF38BQ5VTL8 546 aaKnown RBP26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 IGSF21Q96ID5 467 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 PCMTD1Q96MG8 357 aaPredicted RBP26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 SPG21Q9NZD8 308 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 STAU1O95793 577 aaKnown RBP26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 DNAJB2P25686 324 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 AARSP49588 968 aaKnown RBP eCLIP26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 TAP1Q03518 808 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 ARHGEF19Q8IW93 802 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 TAF4BQ92750 862 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 NT5C1BQ96P26 610 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 VRTNQ9H8Y1 702 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 SIX2Q9NPC8 291 aa26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 FAM207AQ9NSI2 230 aaPredicted RBP26.25■■□□□ 1.79
TM6SF1-204ENST00000379390 TNNC1P63316 161 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 PPP2R2DQ66LE6 453 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 FUT10Q6P4F1 479 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 GJB7Q6PEY0 223 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 DSTYKQ6XUX3 929 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 TMEM169Q96HH4 297 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 SENP8Q96LD8 212 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 GPR62Q9BZJ7 368 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 NIF3L1Q9GZT8 377 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 CDH23Q9H251 3354 aa26.24■■□□□ 1.79
TM6SF1-204ENST00000379390 TRANK1O15050 2925 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 COL4A4P53420 1690 aaPredicted RBP26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 PPM1AP35813 382 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 BMPR1AP36894 532 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 PHLDB3Q6NSJ2 640 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 PPM1KQ8N3J5 372 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 MMS19Q96T76 1030 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 ARID3AQ99856 593 aa26.23■■□□□ 1.79
TM6SF1-204ENST00000379390 SF3B1O75533 1304 aaKnown RBP eCLIP26.23■■□□□ 1.793e-8■■■■■ 155.1
TM6SF1-204ENST00000379390 ATG2AQ2TAZ0 1938 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 A0A1W2PPC1 479 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 FGF18O76093 207 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 ASPAP45381 313 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 ZNF75DP51815 510 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 SMAD3P84022 425 aaKnown RBP26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 DPY19L2P1Q6NXN4 242 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 RRAGAQ7L523 313 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 KLHL23Q8NBE8 558 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 SUSD3Q96L08 255 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 TGS1Q96RS0 853 aaKnown RBP26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 VN1R3Q9BXE9 311 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 SMYD3Q9H7B4 428 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 CERS4Q9HA82 394 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 GDAP2Q9NXN4 497 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 APEX2Q9UBZ4 518 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 RWDD3Q9Y3V2 267 aa26.22■■□□□ 1.79
TM6SF1-204ENST00000379390 A0A1W2PQC6 194 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 CYB561D2O14569 222 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 EPHB6O15197 1021 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 PBX1P40424 430 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 RAP1GAPP47736 663 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 KAT5Q92993 513 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 B3GALT6Q96L58 329 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 SLC28A3Q9HAS3 691 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 TIMM13Q9Y5L4 95 aaPredicted RBP26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 CARNS1A5YM72 827 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 FAM171A1Q5VUB5 890 aa26.21■■□□□ 1.79
TM6SF1-204ENST00000379390 TIFAQ96CG3 184 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms