RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TRPC4APQ8TEL6 797 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 RAD21L1Q9H4I0 556 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 VAMP4O75379 141 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 SERPINH1P50454 418 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 RNF44Q7L0R7 432 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 HDAC6Q9UBN7 1215 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CDH6P55285 790 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 USP10Q14694 798 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 GALNTL6Q49A17 601 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ARSJQ5FYB0 599 aaPredicted RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CLCC1Q96S66 551 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 RGS4P49798 205 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 BCAR1P56945 870 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CDK17Q00537 523 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 LGALS3BPQ08380 585 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 USP19O94966 1318 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CPSF4O95639 269 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 JAK1P23458 1154 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ME3Q16798 604 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 GSPT2Q8IYD1 628 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ZNF786Q8N393 782 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 PCDHA4Q9UN74 947 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 OR7A10O76100 309 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 APRTP07741 180 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 MYL2P10916 166 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ACTR2P61160 394 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 MGAT5BQ3V5L5 792 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 SMAPO00193 183 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 MAGEA10P43363 369 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 KCNK10P57789 538 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 EIF2S3LQ2VIR3 472 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 FOXR1Q6PIV2 292 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 RGS18Q9NS28 235 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCAM1P13591 858 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCAPHQ15003 741 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 MARK2Q7KZI7 788 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 MARK1Q9P0L2 795 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 FGRP09769 529 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 CENPLQ8N0S6 344 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 TMEM35BQ8NCS4 154 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 STOML2Q9UJZ1 356 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 CHMP2BQ9UQN3 213 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 TPST1O60507 370 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
HIPK3-202ENST00000379016 PSMD7P51665 324 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 COPG2Q9UBF2 871 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 LRCH1Q9Y2L9 728 aa13.87□□□□□ -0.19
HIPK3-202ENST00000379016 EHBP1L1Q8N3D4 1523 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 KCNA3P22001 575 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 STIP1P31948 543 aaKnown RBP13.86□□□□□ -0.19
HIPK3-202ENST00000379016 SRP54P61011 504 aaKnown RBP13.86□□□□□ -0.19
HIPK3-202ENST00000379016 CHRNDQ07001 517 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 ARMC3Q5W041 872 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 CDC73Q6P1J9 531 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 C16orf89Q6UX73 402 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 B3GALNT2Q8NCR0 500 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 SLC9A6Q92581 669 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 BTBD3Q9Y2F9 522 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 ACSL4O60488 711 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 POU4F1Q01851 419 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 HPS6Q86YV9 775 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 PARP9Q8IXQ6 854 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 DHTKD1Q96HY7 919 aaPredicted RBP13.86□□□□□ -0.19
HIPK3-202ENST00000379016 CAPN15O75808 1086 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 ECDO95905 644 aaPredicted RBP13.86□□□□□ -0.19
HIPK3-202ENST00000379016 CALB1P05937 261 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 CCR4P51679 360 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 TTC33Q6PID6 262 aaPredicted RBP13.86□□□□□ -0.19
HIPK3-202ENST00000379016 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 WWOXQ9NZC7 414 aa13.86□□□□□ -0.19
HIPK3-202ENST00000379016 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms