RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RHOT2Q8IXI1 618 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 DNAJB3Q8WWF6 145 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 SH3GL2Q99962 352 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 ADPGKQ9BRR6 497 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 STIM2Q9P246 746 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 TREHO43280 583 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 BUB1BO60566 1050 aaPredicted RBP20.74■□□□□ 0.91
SSU72-204ENST00000378726 ZNF200P98182 395 aaPredicted RBP20.74■□□□□ 0.91
SSU72-204ENST00000378726 POU5F1Q01860 360 aaKnown RBP20.74■□□□□ 0.91
SSU72-204ENST00000378726 KYAT1Q16773 422 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 SLC10A6Q3KNW5 377 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 MFSD14CQ5VZR4 134 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 ACAD10Q6JQN1 1059 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 ZNF677Q86XU0 584 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 TAF4BQ92750 862 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 COG5Q9UP83 839 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 CNTN6Q9UQ52 1028 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 MEFVO15553 781 aaPredicted RBP20.73■□□□□ 0.91
SSU72-204ENST00000378726 KIF4AO95239 1232 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
SSU72-204ENST00000378726 EPHB4P54760 987 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 DNAJC21Q5F1R6 531 aaKnown RBP20.73■□□□□ 0.91
SSU72-204ENST00000378726 TRIB2Q92519 343 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 ASB7Q9H672 318 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 CTTNBP2NLQ9P2B4 639 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 RNF14Q9UBS8 474 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 GOLGA8KD6RF30 607 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 NFICP08651 508 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
SSU72-204ENST00000378726 CLEC16AQ2KHT3 1053 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 CFAP221Q4G0U5 840 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 JADE1Q6IE81 842 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 CATSPER4Q7RTX7 472 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 RBBP8NLQ8NC74 664 aaPredicted RBP20.73■□□□□ 0.91
SSU72-204ENST00000378726 ACAP3Q96P50 834 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 OSMRQ99650 979 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 STXBP5LQ9Y2K9 1186 aa20.73■□□□□ 0.91
SSU72-204ENST00000378726 KCNK3O14649 394 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 KRT19P08727 400 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 HOXA11P31270 313 aaPredicted RBP20.72■□□□□ 0.91
SSU72-204ENST00000378726 NOGQ13253 232 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 NT5DC3Q86UY8 548 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 PLCD3Q8N3E9 789 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 ARL8AQ96BM9 186 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 XYLT2Q9H1B5 865 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 RABEP2Q9H5N1 569 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 CHORDC1Q9UHD1 332 aaPredicted RBP20.72■□□□□ 0.91
SSU72-204ENST00000378726 AMFRQ9UKV5 643 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 C17orf102A2RUQ5 167 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 AOC2O75106 756 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 TCEAL1Q15170 157 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 ZNF699Q32M78 642 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 TTMPQ5BVD1 217 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 GNASQ5JWF2 1037 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 C8orf74Q6P047 294 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 EMBQ6PCB8 327 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 PACS2Q86VP3 889 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 C7orf31Q8N865 590 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 CAPS2Q9BXY5 557 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 NIF3L1Q9GZT8 377 aa20.72■□□□□ 0.91
SSU72-204ENST00000378726 MYADML2A6NDP7 307 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 UNGP13051 313 aaPredicted RBP20.71■□□□□ 0.91
SSU72-204ENST00000378726 CYBAP13498 195 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 GNA15P30679 374 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 CCT5P48643 541 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 HADHBP55084 474 aaKnown RBP20.71■□□□□ 0.91
SSU72-204ENST00000378726 C1orf127Q8N9H9 656 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 CAVIN3Q969G5 261 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 CENPFP49454 3210 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 ZSWIM8A7E2V4 1837 aa20.71■□□□□ 0.91
SSU72-204ENST00000378726 OPA1O60313 960 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 WEE2P0C1S8 567 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 GNAT1P11488 350 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 DARSP14868 501 aaKnown RBP20.7■□□□□ 0.9
SSU72-204ENST00000378726 CD58P19256 250 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 EIF4BP23588 611 aaKnown RBP20.7■□□□□ 0.9
SSU72-204ENST00000378726 TNFRSF8P28908 595 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 PRKCZQ05513 592 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 TTC19Q6DKK2 380 aaPredicted RBP20.7■□□□□ 0.9
SSU72-204ENST00000378726 UBR7Q8N806 425 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 CALR3Q96L12 384 aaKnown RBP20.7■□□□□ 0.9
SSU72-204ENST00000378726 CISHQ9NSE2 258 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 SIX4Q9UIU6 781 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 GRIN2DO15399 1336 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 MROH7Q68CQ1 1323 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 GLI1P08151 1106 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 GJA9P57773 515 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 GNGT1P63211 74 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 ALS2CLQ60I27 953 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 CPA5Q8WXQ8 436 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 ZNF653Q96CK0 615 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 CYFIP2Q96F07 1278 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 PBKQ96KB5 322 aa20.7■□□□□ 0.9
SSU72-204ENST00000378726 NXF1Q9UBU9 619 aaKnown RBP20.7■□□□□ 0.9
SSU72-204ENST00000378726 ATMINO43313 823 aaPredicted RBP20.69■□□□□ 0.9
SSU72-204ENST00000378726 KPNA6O60684 536 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 HSF2BPO75031 334 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 NPTXRO95502 500 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 CYP1A2P05177 515 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms