RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ZNF280BQ86YH2 543 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 RSPH1Q8WYR4 309 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 BAP1Q92560 729 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
CCDC107-204ENST00000378409 FAM81BQ96LP2 452 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 UROC1Q96N76 676 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 STK33Q9BYT3 514 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 VRTNQ9H8Y1 702 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 POLIQ9UNA4 740 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 GBF1Q92538 1859 aa16.94■□□□□ 0.3
CCDC107-204ENST00000378409 TSC2P49815 1807 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 B4GALT3O60512 393 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 P4HA1P13674 534 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
CCDC107-204ENST00000378409 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
CCDC107-204ENST00000378409 TNNC1P63316 161 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 DSC1Q08554 894 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 CUL2Q13617 745 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 DRAP1Q14919 205 aaPredicted RBP16.93■□□□□ 0.3
CCDC107-204ENST00000378409 UPP1Q16831 310 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 SV2CQ496J9 727 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 PDXDC1Q6P996 788 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 ENOSF1Q7L5Y1 443 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 LRRC43Q8N309 656 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 HERVK_113Q902F9 699 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 ARID3AQ99856 593 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
CCDC107-204ENST00000378409 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
CCDC107-204ENST00000378409 F8VZ95 297 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 ASPAP45381 313 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 JAM2P57087 298 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
CCDC107-204ENST00000378409 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 COLGALT2Q8IYK4 626 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 MMS19Q96T76 1030 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
CCDC107-204ENST00000378409 NRDE2Q9H7Z3 1164 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 HCSTQ9UBK5 93 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 DNAJB4Q9UDY4 337 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 SNX9Q9Y5X1 595 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 NLRC5Q86WI3 1866 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 CEP290O15078 2479 aa16.92■□□□□ 0.3
CCDC107-204ENST00000378409 KPNA7A9QM74 516 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 SPTLC1O15269 473 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
CCDC107-204ENST00000378409 IGFBP6P24592 240 aaPredicted RBP16.91■□□□□ 0.3
CCDC107-204ENST00000378409 USP8P40818 1118 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 STAT1P42224 750 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 MAGEA10P43363 369 aaPredicted RBP16.91■□□□□ 0.3
CCDC107-204ENST00000378409 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 OR1G1P47890 313 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 LILRA4P59901 499 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 SFMBT2Q5VUG0 894 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 C3orf58Q8NDZ4 430 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 YME1L1Q96TA2 773 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 NUCKS1Q9H1E3 243 aaKnown RBP16.91■□□□□ 0.3
CCDC107-204ENST00000378409 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 MYO6Q9UM54 1294 aa16.91■□□□□ 0.3
CCDC107-204ENST00000378409 PRG3Q9Y2Y8 225 aaPredicted RBP16.91■□□□□ 0.3
CCDC107-204ENST00000378409 B3GAT3O94766 335 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 GFPT2O94808 682 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 WEE2P0C1S8 567 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 KRT5P13647 590 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 CD58P19256 250 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 SOX5P35711 763 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 CDH8P55286 799 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 YWHAEP62258 255 aaKnown RBP16.9■□□□□ 0.3
CCDC107-204ENST00000378409 ARID5AQ03989 594 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 BTG3Q14201 252 aaPredicted RBP16.9■□□□□ 0.3
CCDC107-204ENST00000378409 ASIC2Q16515 512 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 DCLRE1AQ6PJP8 1040 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 HASPINQ8TF76 798 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 SHC3Q92529 594 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 ZNF689Q96CS4 500 aaPredicted RBP16.9■□□□□ 0.3
CCDC107-204ENST00000378409 FAXDC2Q96IV6 333 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 PANX2Q96RD6 677 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 SLC9A7Q96T83 725 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 ZBED2Q9BTP6 218 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 BCO2Q9BYV7 579 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 SDCBP2Q9H190 292 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 RC3H2Q9HBD1 1191 aaKnown RBP16.9■□□□□ 0.3
CCDC107-204ENST00000378409 ZNHIT6Q9NWK9 470 aaKnown RBP16.9■□□□□ 0.3
CCDC107-204ENST00000378409 PCDHB4Q9Y5E5 795 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 VWA8A3KMH1 1905 aa16.9■□□□□ 0.3
CCDC107-204ENST00000378409 F8W810 466 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.29
CCDC107-204ENST00000378409 KIF4AO95239 1232 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 GJB5O95377 273 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 SPOUT1Q5T280 376 aaKnown RBP16.89■□□□□ 0.29
CCDC107-204ENST00000378409 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms