RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CYB5D1Q6P9G0 228 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KATNAL2Q8IYT4 538 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MCUQ8NE86 351 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 DNAJC9Q8WXX5 260 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 GPAMQ9HCL2 828 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PCDHGA3Q9Y5H0 932 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF12P17014 697 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NFIAQ12857 509 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 FRG1Q14331 258 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 FAM71AQ8IYT1 594 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 CEP295NLQ96MC4 621 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRN2O75325 713 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 STYK1Q6J9G0 422 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 DNAJC10Q8IXB1 793 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MTMR1Q13613 665 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 CYP1B1Q16678 543 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC24Q50LG9 513 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SPDL1Q96EA4 605 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SLC9A7Q96T83 725 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC1Q9BTT6 524 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 BTBD19C9JJ37 291 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TNFAIP8O95379 198 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 GPC3P51654 580 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PIGWQ7Z7B1 504 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PRPF18Q99633 342 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TRIM54Q9BYV2 358 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PIK3CGP48736 1102 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC31Q6UY01 552 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ZWILCHQ9H900 591 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 GIN1Q9NXP7 522 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 H3BMM5 538 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PALMDQ9NP74 551 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 CCNL1Q9UK58 526 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 RBM20Q5T481 1227 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 KLHL7Q8IXQ5 586 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MAPK8IP1Q9UQF2 711 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ZBED1O96006 694 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TUFMP49411 452 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 AMPD2Q01433 879 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 C2CD2LO14523 706 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 OLR1P78380 273 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 OLFML2BQ68BL8 750 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 RASSF5Q8WWW0 418 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 VPS50Q96JG6 964 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NLRC4Q9NPP4 1024 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MYL3P08590 195 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PTF1AQ7RTS3 328 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PCDH9Q9HC56 1237 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MINDY2Q8NBR6 621 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 IGSF9BQ9UPX0 1349 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 CPA1P15085 419 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TIMM50Q3ZCQ8 353 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NAA35Q5VZE5 725 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ZBTB18Q99592 522 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NKRFO15226 690 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NAMPTP43490 491 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PREPLQ4J6C6 727 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MAGEC1O60732 1142 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SPAG7O75391 227 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 HARS2P49590 506 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SLC34A1Q06495 639 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 HAUS6Q7Z4H7 955 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 FAM151AQ8WW52 585 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ANO3Q9BYT9 981 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SLC8A2Q9UPR5 921 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TRPM1Q7Z4N2 1603 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC53A6NM62 1247 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 POLGP54098 1239 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PREX2Q70Z35 1606 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 DIXDC1Q155Q3 683 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 GPD1LQ8N335 351 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MAGEA4P43358 317 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SEPT1Q8WYJ6 367 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TRIM63Q969Q1 353 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 BDH2Q9BUT1 245 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ERAP1Q9NZ08 941 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ADAM28Q9UKQ2 775 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 NVLO15381 856 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM191BP0C7N4 346 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PCSK1P29120 753 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 COQ4Q9Y3A0 265 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MMEL1Q495T6 779 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 C12orf50Q8NA57 414 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MANSC1Q9H8J5 431 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 UBP1Q9NZI7 540 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ADCY3O60266 1144 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 MCF2P10911 925 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 KRT4P19013 534 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 COILP38432 576 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC8EQ6NSJ5 796 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TATDN2Q93075 761 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ANKZF1Q9H8Y5 726 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 DNAJC5BQ9UF47 199 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 ADGRB1O14514 1584 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TCRBV5S4A2TA0A5A2 114 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 DEAF1O75398 565 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms