RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ATXN7L3BQ96GX2 97 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SMYD3Q9H7B4 428 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ATP6V0A4Q9HBG4 840 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HERC5Q9UII4 1024 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MAN1A1P33908 653 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NRLP54845 237 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 KIF22Q14807 665 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HIF1AQ16665 826 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 WDR72Q3MJ13 1102 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ISLR2Q6UXK2 745 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MCOLN2Q8IZK6 566 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM71DQ8N9W8 422 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 BBOF1Q8ND07 529 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SYTL5Q8TDW5 730 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 KDM4CQ9H3R0 1056 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZDHHC18Q9NUE0 388 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TXNDC16Q9P2K2 825 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 COL18A1P39060 1754 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TOM1L1O75674 476 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PSAPP07602 524 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CIITAP33076 1130 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PHBP35232 272 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MMP13P45452 471 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RGS7P49802 495 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 POLE2P56282 527 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HADHQ16836 314 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GPAT2Q6NUI2 795 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 IVNS1ABPQ9Y6Y0 642 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 I3L4J1 428 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CES2O00748 559 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SMIM24O75264 130 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 C11orf63Q6NUN7 778 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 WRNIP1Q96S55 665 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 DCLK3Q9C098 648 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CHRNB2P17787 502 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 EPHB2P29323 1055 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MTDHQ86UE4 582 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PPP1R36Q96LQ0 422 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
TNFRSF1B-201ENST00000376259 A0A1W2PPM1 405 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CCDC78A2IDD5 438 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GGPS1O95749 300 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 VIL1P09327 827 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GZMAP12544 262 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RAP1GAPP47736 663 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TMPRSS15P98073 1019 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 KRT76Q01546 638 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FITM2Q8N6M3 262 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAF2Q96CS3 445 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HEXIM2Q96MH2 286 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZMYM2Q9UBW7 1377 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RFX1P22670 979 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CCND2P30279 289 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 HOXA10P31260 410 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PTGIRP43119 386 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TFDP1Q14186 410 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GBP7Q8N8V2 638 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TMEM35BQ8NCS4 154 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 AGO4Q9HCK5 861 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ARMCX1Q9P291 453 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MCF2LO15068 1137 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CYP24A1Q07973 514 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ALCAMQ13740 583 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 BMT2Q1RMZ1 405 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM71AQ8IYT1 594 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GLIS1Q8NBF1 620 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RNF149Q8NC42 400 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 BSNDQ8WZ55 320 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM161BQ96MY7 647 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 FAM111AQ96PZ2 611 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MIS12Q9H081 205 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CACNA1SQ13698 1873 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CFAP73A6NFT4 308 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ENTPD3O75355 529 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TCF4P15884 667 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RPA3P35244 121 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 EPHB1P54762 984 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 STAT4Q14765 748 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 EFTUD2Q15029 972 aaKnown RBP eCLIP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZNF699Q32M78 642 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 YTHDF3Q7Z739 585 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NETO2Q8NC67 525 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MYLK2Q9H1R3 596 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NCANO14594 1321 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 LPXNO60711 386 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ADRA1DP25100 572 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CAP2P40123 477 aa15.17■□□□□ 0.02
TNFRSF1B-201ENST00000376259 JAK3P52333 1124 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms