RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 FBXO28Q9NVF7 368 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 RAB20Q9NX57 234 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ASMTLO95671 621 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ZSCAN5DPP0CG00 497 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 GM2AP17900 193 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 CD58P19256 250 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 SSR1P43307 286 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 TAS2R40P59535 323 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ACVR2BQ13705 512 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 STAT4Q14765 748 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 P3H1Q32P28 736 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 ZNF449Q6P9G9 518 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 GSTA5Q7RTV2 222 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 IL31RAQ8NI17 732 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 KIFAP3Q92845 792 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 WRNIP1Q96S55 665 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 MXRA8Q9BRK3 442 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 KIAA1683Q9H0B3 1180 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 USTQ9Y2C2 406 aa14.97□□□□□ -0.01
CLCNKA-202ENST00000375692 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 P4HBP07237 508 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 CFHP08603 1231 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 FDX1P10109 184 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 GCKP35557 465 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 PEX19P40855 299 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 GPC3P51654 580 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 POLGP54098 1239 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 KLF1Q13351 362 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 FASTKD3Q14CZ7 662 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 CAPRIN2Q6IMN6 1127 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 DPY19L2Q6NUT2 758 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 APOBEC3FQ8IUX4 373 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 FBXL13Q8NEE6 735 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 TXLNGQ9NUQ3 528 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 USP20Q9Y2K6 914 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 EXOC1LA0A1B0GW35 172 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 UNGP13051 313 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 MAN1A1P33908 653 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 RPA3P35244 121 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 SKIV2L2P42285 1042 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 CCDC15Q0P6D6 951 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 SETDB1Q15047 1291 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 UGCGQ16739 394 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 FAM102BQ5T8I3 360 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 SV2AQ7L0J3 742 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 TRABD2AQ86V40 505 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 GRAMD1AQ96CP6 724 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 LRRC37BQ96QE4 947 aa14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 RAB3IPQ96QF0 476 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-202ENST00000375692 DHX15O43143 795 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 CBX6O95503 412 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 T-ENOLP0DO92 83 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 ETS1P14921 441 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 CNGA1P29973 690 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 ALCAMQ13740 583 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 ATP13A4Q4VNC1 1196 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PLA2G4FQ68DD2 849 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 MAIP1Q8WWC4 291 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 RIT2Q99578 217 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 KIAA1586Q9HCI6 787 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 H0Y3Z8 333 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PMM2O15305 246 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 KRT10P13645 584 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 GNAZP19086 355 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 YWHABP31946 246 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 SOX10P56693 466 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 KAZNQ674X7 775 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 LMBRD2Q68DH5 695 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 LONP2Q86WA8 852 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PASD1Q8IV76 773 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 CCDC89Q8N998 374 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 FAM13CQ8NE31 585 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 DENND1AQ8TEH3 1009 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 NAF1Q96HR8 494 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 OSBPL8Q9BZF1 889 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 LRMDAQ9H2I8 198 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 TRABDQ9H4I3 376 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 COQ4Q9Y3A0 265 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 MRPL11Q9Y3B7 192 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 STARD13Q9Y3M8 1113 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 MYPNQ86TC9 1320 aa14.95□□□□□ -0.02
CLCNKA-202ENST00000375692 PEX11AO75192 247 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 PIAS1O75925 651 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 KRT15P19012 456 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 KLRC2P26717 231 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 EPHB2P29323 1055 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms