RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SEZ6Q53EL9 994 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 ZBTB41Q5SVQ8 909 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CD302Q8IX05 232 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 UBLCP1Q8WVY7 318 aaPredicted RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 SEC14L1Q92503 715 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 ERP44Q9BS26 406 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 NEUROG2Q9H2A3 272 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PCDHA3Q9Y5H8 950 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PTPRJQ12913 1337 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 WDR81Q562E7 1941 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 FAM187AA6NFU0 413 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 VNN1O95497 513 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 SRGAP2CP0DJJ0 459 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 DRP2Q13474 957 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 MTMR3Q13615 1198 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CUL2Q13617 745 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 TMEM270Q6UE05 265 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 ZPBP2Q6X784 338 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 MCOLN2Q8IZK6 566 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CD101Q93033 1021 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 CAPS2Q9BXY5 557 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
HMGCL-202ENST00000374487 PHF2O75151 1096 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 MYBL1P10243 752 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-202ENST00000374487 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-202ENST00000374487 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 IER5Q5VY09 327 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 TAPT1Q6NXT6 567 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-202ENST00000374487 ZBTB33Q86T24 672 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 C18orf8Q96DM3 657 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 FMO2Q99518 471 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
HMGCL-202ENST00000374487 CENPHQ9H3R5 247 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGCL-202ENST00000374487 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
HMGCL-202ENST00000374487 TOM1L1O75674 476 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 MYZAPP0CAP1 466 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CTNNA2P26232 953 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 GNA15P30679 374 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 FLT3P36888 993 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 MLLT1Q03111 559 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 NCOA4Q13772 614 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 LRRC31Q6UY01 552 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 OR5B17Q8NGF7 314 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 A6NNZ2 444 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 MYO1FO00160 1098 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 PODXLO00592 558 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 GAS2O43903 313 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 ARIH2O95376 493 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 EDN1P05305 212 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 SMPD1P17405 629 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 RRM1P23921 792 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 MAPK6Q16659 721 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 LIN9Q5TKA1 542 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 DUPD1Q68J44 220 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CCDC137Q6PK04 289 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CPNE8Q86YQ8 564 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CCDC105Q8IYK2 499 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 COPS5Q92905 334 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 GPR20Q99678 358 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 AVENQ9NQS1 362 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-202ENST00000374487 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
HMGCL-202ENST00000374487 SHOX2O60902 331 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms