RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 PIN4Q9Y237 131 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 KPNA6O60684 536 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 BRD2P25440 801 aaKnown RBP18.03■□□□□ 0.48
PTPN20-203ENST00000374342 HOXC8P31273 242 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 VSNL1P62760 191 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 NOMO3P69849 1222 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 CAP1Q01518 475 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 MESDQ14696 234 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 PCBP1Q15365 356 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN20-203ENST00000374342 CC2D1AQ6P1N0 951 aaPredicted RBP18.03■□□□□ 0.48
PTPN20-203ENST00000374342 CXCL17Q6UXB2 119 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 MCOLN2Q8IZK6 566 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 TRIM11Q96F44 468 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 SELENOOQ9BVL4 669 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 SPC25Q9HBM1 224 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 SNTG2Q9NY99 539 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 RAB21Q9UL25 225 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
PTPN20-203ENST00000374342 CCDC151A5D8V7 595 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 SEPT4O43236 478 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 RARBP10826 455 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 BRD3Q15059 726 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 WDR72Q3MJ13 1102 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 C2CD6Q53TS8 623 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 BTBD6Q96KE9 485 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 C11orf70Q9BRQ4 267 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 TRIM6Q9C030 488 aaPredicted RBP18.02■□□□□ 0.48
PTPN20-203ENST00000374342 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
PTPN20-203ENST00000374342 SMYD3Q9H7B4 428 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 UVRAGQ9P2Y5 699 aa18.02■□□□□ 0.48
PTPN20-203ENST00000374342 NOC2LQ9Y3T9 749 aaKnown RBP18.02■□□□□ 0.48
PTPN20-203ENST00000374342 DDX3YO15523 660 aaKnown RBP18.02■□□□□ 0.47
PTPN20-203ENST00000374342 TOMM70O94826 608 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 CACNB2Q08289 660 aaPredicted RBP18.02■□□□□ 0.47
PTPN20-203ENST00000374342 MON1BQ7L1V2 547 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 CXorf38Q8TB03 319 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 ZNF606Q8WXB4 792 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 SNX27Q96L92 541 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 APOL6Q9BWW8 343 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 BCO2Q9BYV7 579 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 NXF3Q9H4D5 531 aaKnown RBP18.02■□□□□ 0.47
PTPN20-203ENST00000374342 DPP3Q9NY33 737 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 ITGA11Q9UKX5 1188 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 AGAP1Q9UPQ3 857 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 HES2Q9Y543 173 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 ALG6Q9Y672 507 aa18.02■□□□□ 0.47
PTPN20-203ENST00000374342 TARSL2A2RTX5 802 aaKnown RBP18.01■□□□□ 0.47
PTPN20-203ENST00000374342 PGRMC1O00264 195 aaKnown RBP18.01■□□□□ 0.47
PTPN20-203ENST00000374342 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
PTPN20-203ENST00000374342 MYBL1P10243 752 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 ELNP15502 786 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 YARSP54577 528 aaKnown RBP18.01■□□□□ 0.47
PTPN20-203ENST00000374342 SP3Q02447 781 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 PHLDB2Q86SQ0 1253 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 CD302Q8IX05 232 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 CXCL16Q9H2A7 254 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 ARFGAP3Q9NP61 516 aa18.01■□□□□ 0.47
PTPN20-203ENST00000374342 PCNTO95613 3336 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 SCN1AP35498 2009 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ERLIN1O75477 346 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 PRKAR2AP13861 404 aaKnown RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 COMTP21964 271 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 RRM1P23921 792 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 CCND3P30281 292 aaPredicted RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 AXLP30530 894 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ATICP31939 592 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 CRYBB1P53674 252 aaPredicted RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 CDH8P55286 799 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 DEFB115Q30KQ5 88 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 NBPF20Q3BBV1 942 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 DCAF12L1Q5VU92 463 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 C8orf74Q6P047 294 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 LLGL2Q6P1M3 1020 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 TAF2Q6P1X5 1199 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 MMS22LQ6ZRQ5 1243 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ACTRT1Q8TDG2 376 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 HPDLQ96IR7 371 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 XPNPEP3Q9NQH7 507 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 AVENQ9NQS1 362 aaPredicted RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 RRP9O43818 475 aaKnown RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 MRPS25P82663 173 aaKnown RBP18■□□□□ 0.47
PTPN20-203ENST00000374342 WDR93Q6P2C0 686 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ZSWIM1Q9BR11 485 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.47
PTPN20-203ENST00000374342 LRRC1Q9BTT6 524 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ADAM22Q9P0K1 906 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 ANAPC7Q9UJX3 599 aa18■□□□□ 0.47
PTPN20-203ENST00000374342 MIF4GDA9UHW6 222 aaKnown RBP17.99■□□□□ 0.47
PTPN20-203ENST00000374342 SPOPO43791 374 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 RECQL4O94761 1208 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 TUBBP07437 444 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 P4HA1P13674 534 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 CD19P15391 556 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 MARCKSL1P49006 195 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 RBP5P82980 135 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms