RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SEPT10Q9P0V9 454 aa14□□□□□ -0.17
NCDN-203ENST00000373253 PHF2O75151 1096 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 FARP2O94887 1054 aaPredicted RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 NAMPTP43490 491 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 GCLCP48506 637 aaPredicted RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 C1orf220Q5T0J3 134 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 NIPA1Q7RTP0 329 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 MCOLN2Q8IZK6 566 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 ELAC2Q9BQ52 826 aaKnown RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 FZD9O00144 591 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 PPFIA4O75335 1185 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 TOM1L1O75674 476 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 MYL3P08590 195 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 KRT3P12035 628 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 ATP4AP20648 1035 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 CHRNA3P32297 505 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 COILP38432 576 aaPredicted RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 MNAT1P51948 309 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 ITGA8P53708 1063 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 CCNA1P78396 465 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 IFI35P80217 286 aaPredicted RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 KIF22Q14807 665 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 PAN2Q504Q3 1202 aaKnown RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 VIPAS39Q9H9C1 493 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
NCDN-203ENST00000373253 FAM169AQ9Y6X4 670 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 ADCY3O60266 1144 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 NPTXRO95502 500 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 RARBP10826 455 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 AKAP5P24588 427 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 P3H1Q32P28 736 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 LBX2Q6XYB7 198 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.173e-8■□□□□ 10.1
NCDN-203ENST00000373253 OSMRQ99650 979 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 CTNNAL1Q9UBT7 734 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
NCDN-203ENST00000373253 TULP2O00295 520 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 PLA2G6O60733 806 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 PPP1R37O75864 691 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 ADORA2AP29274 412 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 LSP1P33241 339 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 ARSEP51690 589 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 IZUMO3Q5VZ72 239 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 ARMCX2Q7L311 632 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
NCDN-203ENST00000373253 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 TMEM121Q9BTD3 319 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
NCDN-203ENST00000373253 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 CSPG5O95196 566 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 CLTAP09496 248 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 TCF4P15884 667 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 MUTP22033 750 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 GARTP22102 1010 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 STX2P32856 288 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 TAS2R40P59535 323 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 CLEC16AQ2KHT3 1053 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 FAM133BQ5BKY9 247 aaKnown RBP13.98□□□□□ -0.17
NCDN-203ENST00000373253 CEP57Q86XR8 500 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 SLC9A9Q8IVB4 645 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 MAD1L1Q9Y6D9 718 aa13.98□□□□□ -0.17
NCDN-203ENST00000373253 NFICP08651 508 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 IRX4P78413 519 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 KIAA0319LQ8IZA0 1049 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 SCFD2Q8WU76 684 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
NCDN-203ENST00000373253 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 GDF3Q9NR23 364 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 METTL5Q9NRN9 209 aaKnown RBP13.97□□□□□ -0.17
NCDN-203ENST00000373253 ATP2A1O14983 1001 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 OGTO15294 1046 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 RFX1P22670 979 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 PHKA2P46019 1235 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 TTC27Q6P3X3 843 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 ZNF662Q6ZS27 426 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 C12orf29Q8N999 325 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 OR6J1Q8NGC5 347 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 NKIRAS1Q9NYS0 192 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 SAMD15Q9P1V8 674 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 KCNG1Q9UIX4 513 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 PDHXO00330 501 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 BANF1O75531 89 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 CELF2O95319 508 aaKnown RBP13.97□□□□□ -0.17
NCDN-203ENST00000373253 LCP1P13796 627 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 YWHAGP61981 247 aaKnown RBP eCLIP13.97□□□□□ -0.17
NCDN-203ENST00000373253 ICE2Q659A1 982 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 TWF2Q6IBS0 349 aaKnown RBP13.97□□□□□ -0.17
NCDN-203ENST00000373253 LMO3Q8TAP4 145 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 MED10Q9BTT4 135 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 UVRAGQ9P2Y5 699 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 SYNPO2Q9UMS6 1093 aa13.97□□□□□ -0.17
NCDN-203ENST00000373253 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
NCDN-203ENST00000373253 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms