RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 TAF4O00268 1085 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 ZZEF1O43149 2961 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 RHOBTB1O94844 696 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 CPB1P15086 417 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 CSRP1P21291 193 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 RPS6KB1P23443 525 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 EVCP57679 992 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 TNK2Q07912 1038 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 RNF19BQ6ZMZ0 732 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 TMC8Q8IU68 726 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 CAMKK1Q8N5S9 505 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 TMEM209Q96SK2 561 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 SLC38A7Q9NVC3 462 aa17.22■□□□□ 0.35
TRAPPC3-203ENST00000373163 BCLAF3A2AJT9 711 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 CPLX1O14810 134 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 GRSF1Q12849 480 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 DEPTORQ8TB45 409 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 HHIPQ96QV1 700 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 TMEM9BQ9NQ34 198 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 OBP2AQ9NY56 170 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.35
TRAPPC3-203ENST00000373163 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 PLD1Q13393 1074 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 KARSQ15046 597 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 ITPRIPL2Q3MIP1 535 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 TMEM196Q5HYL7 178 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 ATF7IP2Q5U623 682 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 KIAA1211LQ6NV74 962 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 BPIFB1Q8TDL5 484 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 KCNB2Q92953 911 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 MKNK1Q9BUB5 465 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 POLR3BQ9NW08 1133 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 NEUROG3Q9Y4Z2 214 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
TRAPPC3-203ENST00000373163 KHNYNO15037 678 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 DCLK1O15075 740 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 MCM4P33991 863 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 NAMPTP43490 491 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 EPHB3P54753 998 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 PTPAQ15257 358 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 XKR4Q5GH76 650 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 APPL2Q8NEU8 664 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 DDX12PQ92771 950 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 KIF12Q96FN5 646 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 SUSD3Q96L08 255 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 DNAJC25Q9H1X3 360 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
TRAPPC3-203ENST00000373163 HYAL3O43820 417 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 RPL9P32969 192 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 GRM5P41594 1212 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 GPR158Q5T848 1215 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 ALKAL1Q6UXT8 129 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 CEP120Q8N960 986 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 DEFB124Q8NES8 71 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 BEST2Q8NFU1 509 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 OXER1Q8TDS5 423 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 ZMAT2Q96NC0 199 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 PGLYRP2Q96PD5 576 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 TTC12Q9H892 705 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 THG1LQ9NWX6 298 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-203ENST00000373163 FASNP49327 2511 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 CDX4O14627 284 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 RNF40O75150 1001 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 VNN2O95498 520 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 PRAMEF12O95522 483 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 GBP1P32455 592 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 MCM2P49736 904 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 OSTNP61366 133 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 PDCD11Q14690 1871 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 CALCRLQ16602 461 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 ARHGAP15Q53QZ3 475 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 EARS2Q5JPH6 523 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 MSRB2Q9Y3D2 182 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 ZFYVE26Q68DK2 2539 aa17.17■□□□□ 0.34
TRAPPC3-203ENST00000373163 TRDMT1O14717 391 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-203ENST00000373163 FGF19O95750 216 aa17.16■□□□□ 0.34
TRAPPC3-203ENST00000373163 EGFP01133 1207 aa17.16■□□□□ 0.34
TRAPPC3-203ENST00000373163 OR4Q2P0C623 313 aa17.16■□□□□ 0.34
TRAPPC3-203ENST00000373163 KCNE1P15382 129 aa17.16■□□□□ 0.34
TRAPPC3-203ENST00000373163 MARCKSP29966 332 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms