RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TRADDQ15628 312 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 RASIP1Q5U651 963 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 FRA10AC1Q70Z53 315 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 DCLK2Q8N568 766 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 SH2D3AQ9BRG2 576 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 ZCCHC17Q9NP64 241 aaKnown RBP11.02□□□□□ -0.64
NUP188-201ENST00000372577 KCND1Q9NSA2 647 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 FBXO28Q9NVF7 368 aa11.02□□□□□ -0.64
NUP188-201ENST00000372577 A0A087X0T9 212 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 PIK3R2O00459 728 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 LSM8O95777 96 aaKnown RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 FAM228BP0C875 321 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 NPTX2P47972 431 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SERPINB4P48594 390 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 GTF2A2P52657 109 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SPATA21Q7Z572 469 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 AFG1LQ8WV93 481 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 TGFB3P10600 412 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 ITGA4P13612 1032 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 PRAMEP78395 509 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SNX17Q15036 470 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 E2F5Q15329 346 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 PDZD8Q8NEN9 1154 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 MKL1Q969V6 931 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 HPDLQ96IR7 371 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 GNGT2O14610 69 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 HOXC6P09630 235 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 CYP2C9P11712 490 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 YWHAHQ04917 246 aaPredicted RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SAMD7Q7Z3H4 446 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SPIRE2Q8WWL2 714 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 SLC5A5Q92911 643 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 CCDC124Q96CT7 223 aaKnown RBP11.02□□□□□ -0.65
NUP188-201ENST00000372577 PDCD2LQ9BRP1 358 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 AIPL1Q9NZN9 384 aa11.02□□□□□ -0.65
NUP188-201ENST00000372577 GCKP35557 465 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 DCP1BQ8IZD4 617 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 NOA1Q8NC60 698 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 RAPGEF5Q92565 580 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 EML4Q9HC35 981 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 FIS1Q9Y3D6 152 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 FAM47DPA6NHR8 397 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 VCAM1P19320 739 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 TBX2Q13207 712 aaPredicted RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 CCL15Q16663 113 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 PPIL6Q8IXY8 311 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 SERPINB12Q96P63 405 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 RSPH10B2B2RC85 870 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 RSPH10BP0C881 870 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 CPB1P15086 417 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 ATICP31939 592 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 MCL1Q07820 350 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 MAPK7Q13164 816 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 ZNF235Q14590 738 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 TSPAN17Q96FV3 270 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 THAP2Q9H0W7 228 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 ZC3H7BQ9UGR2 993 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 XPO7Q9UIA9 1087 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 F8VZ95 297 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 NVLO15381 856 aaKnown RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 VDRP11473 427 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 TAF6P49848 677 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 ZNF200P98182 395 aaPredicted RBP11.01□□□□□ -0.65
NUP188-201ENST00000372577 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
NUP188-201ENST00000372577 FMN2Q9NZ56 1722 aa11□□□□□ -0.65
NUP188-201ENST00000372577 FOXN3O00409 490 aaPredicted RBP11□□□□□ -0.65
NUP188-201ENST00000372577 SMIM24O75264 130 aa11□□□□□ -0.65
NUP188-201ENST00000372577 RPS6KA5O75582 802 aa11□□□□□ -0.65
NUP188-201ENST00000372577 BRD2P25440 801 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 NNMTP40261 264 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CASP2P42575 452 aa11□□□□□ -0.65
NUP188-201ENST00000372577 MAGEA4P43358 317 aa11□□□□□ -0.65
NUP188-201ENST00000372577 RAD51Q06609 339 aa11□□□□□ -0.65
NUP188-201ENST00000372577 C11orf63Q6NUN7 778 aa11□□□□□ -0.65
NUP188-201ENST00000372577 XPO6Q96QU8 1125 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 CYP3A43Q9HB55 503 aa11□□□□□ -0.65
NUP188-201ENST00000372577 RAB6BQ9NRW1 208 aa11□□□□□ -0.65
NUP188-201ENST00000372577 TJP2Q9UDY2 1190 aa11□□□□□ -0.65
NUP188-201ENST00000372577 FRMPD4Q14CM0 1322 aa11□□□□□ -0.65
NUP188-201ENST00000372577 NKRFO15226 690 aaKnown RBP eCLIP11□□□□□ -0.65
NUP188-201ENST00000372577 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 HERVK_113P62684 666 aa11□□□□□ -0.65
NUP188-201ENST00000372577 GUCY1A3Q02108 690 aa11□□□□□ -0.65
NUP188-201ENST00000372577 ZNF473Q8WTR7 871 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 ZIM3Q96PE6 472 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms