RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 NRBP2Q9NSY0 501 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP8A1Q9Y2Q0 1164 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 DOCK5Q9H7D0 1870 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 C17orf102A2RUQ5 167 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 O00370 1275 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 KIAA0391O15091 583 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 HBP1O60381 514 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 DKC1O60832 514 aaKnown RBP eCLIP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 CAND2O75155 1236 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 FGGP02679 453 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 OATP04181 439 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 RFX1P22670 979 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 RPA1P27694 616 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 CDK7P50613 346 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 GALCP54803 685 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 RTP1P59025 263 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 HIC1Q14526 733 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PPP1R7Q15435 360 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 GDF6Q6KF10 455 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 HIBCHQ6NVY1 386 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 RHOT2Q8IXI1 618 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 ZBTB10Q96DT7 871 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 MKNK1Q9BUB5 465 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TRPV6Q9H1D0 765 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 TRMT13Q9NUP7 481 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 INTS9Q9NV88 658 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 KIAA0100Q14667 2235 aaKnown RBP12.22□□□□□ -0.45
TSPAN1-201ENST00000372003 PHF2O75151 1096 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 RTN2O75298 545 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 KRT18P05783 430 aaKnown RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 ACTN1P12814 892 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 ATP5DP30049 168 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 YWHABP31946 246 aaKnown RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 GBP2P32456 591 aaPredicted RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 SOX5P35711 763 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 TLE2Q04725 743 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 MAPK7Q13164 816 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 GRIK4Q16099 956 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 MTERF2Q49AM1 385 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 XKR3Q5GH77 459 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 ANO5Q75V66 913 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 C4orf19Q8IY42 314 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 SYT2Q8N9I0 419 aaPredicted RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 CTNNBL1Q8WYA6 563 aaPredicted RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 DPF3Q92784 378 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 FAM167AQ96KS9 214 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 STK33Q9BYT3 514 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 DPH5Q9H2P9 285 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 ADAM7Q9H2U9 754 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.46
TSPAN1-201ENST00000372003 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 DCDC2CA8MYV0 355 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 E9PMD0 336 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 LIN7AO14910 233 aaPredicted RBP12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 TREHO43280 583 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 B4GALT4O60513 344 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 BUB1BO60566 1050 aaPredicted RBP12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 STBD1O95210 358 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 SSBP05455 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 RARGP13631 454 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 CCND1P24385 295 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 GIT2Q14161 759 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 C11orf63Q6NUN7 778 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 ZDHHC24Q6UX98 284 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 JAMLQ86YT9 394 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 SLC35C1Q96A29 364 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 SYT11Q9BT88 431 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 FGFBP2Q9BYJ0 223 aa12.2□□□□□ -0.46
TSPAN1-201ENST00000372003 UBE4BO95155 1302 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 NR3C1P04150 777 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 GNAT1P11488 350 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CYP2C9P11712 490 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 GAP43P17677 238 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SKIV2L2P42285 1042 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 PTPN11Q06124 597 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SNX17Q15036 470 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms