RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 NT5C1BQ96P26 610 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 APOBEC3GQ9HC16 384 aaKnown RBP18.93■□□□□ 0.62
VPS37B-202ENST00000371248 FAM207AQ9NSI2 230 aaPredicted RBP18.93■□□□□ 0.62
VPS37B-202ENST00000371248 NUB1Q9Y5A7 615 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 SPTLC1O15269 473 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 KIF4AO95239 1232 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 ITGB1P05556 798 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 MYOGP15173 224 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 ZNF667Q5HYK9 610 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 PHLDB3Q6NSJ2 640 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 DPY19L2P1Q6NXN4 242 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 SIX2Q9NPC8 291 aa18.93■□□□□ 0.62
VPS37B-202ENST00000371248 NXF1Q9UBU9 619 aaKnown RBP18.93■□□□□ 0.62
VPS37B-202ENST00000371248 NLRC5Q86WI3 1866 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 KPNA7A9QM74 516 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
VPS37B-202ENST00000371248 SV2CQ496J9 727 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 GJB7Q6PEY0 223 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 KCNT2Q6UVM3 1135 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 CD300LGQ6UXG3 332 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 VSTM4Q8IW00 320 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 COLEC11Q9BWP8 271 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 VRTNQ9H8Y1 702 aa18.92■□□□□ 0.62
VPS37B-202ENST00000371248 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.91■□□□□ 0.62
VPS37B-202ENST00000371248 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.91■□□□□ 0.62
VPS37B-202ENST00000371248 TADA2AO75478 443 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 LAG3P18627 525 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 KLHDC7AQ5VTJ3 777 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 ARHGEF19Q8IW93 802 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 PPM1KQ8N3J5 372 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 NEK11Q8NG66 645 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 ZNF558Q96NG5 402 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 PLCB1Q9NQ66 1216 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 APEX2Q9UBZ4 518 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 POLIQ9UNA4 740 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 SNX9Q9Y5X1 595 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 BRCC3P46736 316 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 RRAGAQ7L523 313 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 COLGALT1Q8NBJ5 622 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 MMS19Q96T76 1030 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 UBE2TQ9NPD8 197 aaPredicted RBP18.91■□□□□ 0.62
VPS37B-202ENST00000371248 MARCH5Q9NX47 278 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 ADAM28Q9UKQ2 775 aa18.91■□□□□ 0.62
VPS37B-202ENST00000371248 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 EPHB6O15197 1021 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 NOL4O94818 638 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
VPS37B-202ENST00000371248 TNNC1P63316 161 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 TIGD5Q53EQ6 642 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 SPECC1LQ69YQ0 1117 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 DSTYKQ6XUX3 929 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 TMEM173Q86WV6 379 aaPredicted RBP18.9■□□□□ 0.62
VPS37B-202ENST00000371248 AAASQ9NRG9 546 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 PCDHA11Q9Y5I1 949 aa18.9■□□□□ 0.62
VPS37B-202ENST00000371248 LINC01553A4QN01 128 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 I3L4J1 428 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 LINC00271P0C7V0 271 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 UCHL3P15374 230 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 TMC6Q7Z403 805 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 CLP1Q92989 425 aaKnown RBP18.89■□□□□ 0.62
VPS37B-202ENST00000371248 SENP8Q96LD8 212 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 NIF3L1Q9GZT8 377 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 GANQ9H2C0 597 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 PRO3102Q9H379 93 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 GDAP2Q9NXN4 497 aa18.89■□□□□ 0.62
VPS37B-202ENST00000371248 ITIH6Q6UXX5 1313 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 CA3P07451 260 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 P4HA1P13674 534 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 PBX2P40425 430 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.61
VPS37B-202ENST00000371248 POLR2FP61218 127 aaKnown RBP18.89■□□□□ 0.61
VPS37B-202ENST00000371248 DRC7Q8IY82 874 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 BCL7CQ8WUZ0 217 aaPredicted RBP18.89■□□□□ 0.61
VPS37B-202ENST00000371248 KAT5Q92993 513 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 PBX4Q9BYU1 374 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 DNAJC12Q9UKB3 198 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 PCDHB12Q9Y5F1 795 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 FHOD1Q9Y613 1164 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 LAMA3Q16787 3333 aa18.89■□□□□ 0.61
VPS37B-202ENST00000371248 CYB561D2O14569 222 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 PAX3P23760 479 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 ASPAP45381 313 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 CUL2Q13617 745 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 IQCEQ6IPM2 695 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 IGSF21Q96ID5 467 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 ARID3AQ99856 593 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 NUP58Q9BVL2 599 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 NLRC4Q9NPP4 1024 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 AJAP1Q9UKB5 411 aaPredicted RBP18.88■□□□□ 0.61
VPS37B-202ENST00000371248 YBX2Q9Y2T7 364 aaKnown RBP18.88■□□□□ 0.61
VPS37B-202ENST00000371248 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.61
VPS37B-202ENST00000371248 TRAPPC3O43617 180 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 HUS1O60921 280 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 WEE2P0C1S8 567 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 TBXAS1P24557 533 aaPredicted RBP18.88■□□□□ 0.61
VPS37B-202ENST00000371248 CDH8P55286 799 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 GCNT1Q02742 428 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 ARHGAP44Q17R89 818 aa18.88■□□□□ 0.61
VPS37B-202ENST00000371248 SLC39A11Q8N1S5 342 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms