RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 KRT19P08727 400 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 ATP2A2P16615 1042 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 LRPAP1P30533 357 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 CLCNKBP51801 687 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 RBP5P82980 135 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 SPOPLQ6IQ16 392 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 COLGALT2Q8IYK4 626 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 LRRC43Q8N309 656 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 C3orf58Q8NDZ4 430 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 SLC9A7Q96T83 725 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 APOBEC3GQ9HC16 384 aaKnown RBP11.27□□□□□ -0.6
TCTN3-202ENST00000371209 PODXLO00592 558 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 SPTLC1O15269 473 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 NOL4O94818 638 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 TPM3P06753 285 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 CETN1Q12798 172 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 LRMPQ12912 555 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 TRPC3Q13507 836 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 UPP1Q16831 310 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 GJB7Q6PEY0 223 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 CD300LGQ6UXG3 332 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 VSTM4Q8IW00 320 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 CMTR2Q8IYT2 770 aaKnown RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 PHOSPHO2Q8TCD6 241 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 RSPH1Q8WYR4 309 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 TATDN2Q93075 761 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 HPDLQ96IR7 371 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 YME1L1Q96TA2 773 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 MTIF3Q9H2K0 278 aaKnown RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 CWH43Q9H720 699 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 FAM207AQ9NSI2 230 aaPredicted RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 AJAP1Q9UKB5 411 aaPredicted RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 NUB1Q9Y5A7 615 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 MRPL42Q9Y6G3 142 aaKnown RBP11.26□□□□□ -0.61
TCTN3-202ENST00000371209 CHD9Q3L8U1 2897 aa11.26□□□□□ -0.61
TCTN3-202ENST00000371209 LCHNA4D1U4 455 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 GRXCR1A8MXD5 290 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 ZC3H11AO75152 810 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 ITGB1P05556 798 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 PBX3P40426 434 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 SLC11A1P49279 550 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 NOP14P78316 857 aaKnown RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 FOXK1P85037 733 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 BTG3Q14201 252 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 SGSM1Q2NKQ1 1148 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 LRRC52Q8N7C0 313 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 UROC1Q96N76 676 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 GANQ9H2C0 597 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 PLCB1Q9NQ66 1216 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 POLIQ9UNA4 740 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 SCN1AP35498 2009 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 NRP1O14786 923 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 KIF4AO95239 1232 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 STAU1O95793 577 aaKnown RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 GALTP07902 379 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 LINC00271P0C7V0 271 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 CDC25BP30305 580 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 ATICP31939 592 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 OR1G1P47890 313 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 RABGGTBP53611 331 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 BCAR1P56945 870 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 LILRA4P59901 499 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 KLHDC7AQ5VTJ3 777 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 TMEM173Q86WV6 379 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 HASPINQ8TF76 798 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 TAF4BQ92750 862 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 KAT5Q92993 513 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 RAD9AQ99638 391 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 TTYH3Q9C0H2 523 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 MARCH5Q9NX47 278 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 APEX2Q9UBZ4 518 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 PRG3Q9Y2Y8 225 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-202ENST00000371209 INSL6Q9Y581 213 aa11.25□□□□□ -0.61
TCTN3-202ENST00000371209 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms