RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 IFT43Q96FT9 208 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 KLHL4Q9C0H6 718 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 THAP2Q9H0W7 228 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 UBAP1LF5GYI3 381 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 NUP107P57740 925 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 YTHDF3Q7Z739 585 aaKnown RBP18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 HACD3Q9P035 362 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 FAM167AQ96KS9 214 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 TEX12Q9BXU0 123 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 CYP27B1O15528 508 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 RALAP11233 206 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 TRIM60Q495X7 471 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 PPP1R16BQ96T49 567 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 CDC42EP4Q9H3Q1 356 aaKnown RBP18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 PSMC3P17980 439 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 C12orf60Q5U649 245 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 OR6P1Q8NGX9 317 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 NEO1Q92859 1461 aa18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 POLR3FQ9H1D9 316 aaPredicted RBP18.9■□□□□ 0.62
CHRNA4-201ENST00000370263 TRIM49D1C9J1S8 452 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 SPRP35270 261 aaPredicted RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 UGP2Q16851 508 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 DUOXA2Q1HG44 320 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 MIEF2Q96C03 454 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 MCEEQ96PE7 176 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 SIKE1Q9BRV8 207 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 TASP1Q9H6P5 420 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 CNOT7Q9UIV1 285 aaKnown RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 AP3B1O00203 1094 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 RPS6KA5O75582 802 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 ZNF408Q9H9D4 720 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 ABCF3Q9NUQ8 709 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 F8W8V4 182 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 P4HA2O15460 535 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 SERPINI2O75830 405 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 DGKIO75912 1065 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 NUDT2P50583 147 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 HSPA2P54652 639 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 SPOUT1Q5T280 376 aaKnown RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 CLEC4GQ6UXB4 293 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 ZNF786Q8N393 782 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 TIPINQ9BVW5 301 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 GTF3C4Q9UKN8 822 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 KIAA0391O15091 583 aaKnown RBP18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 TTI2Q6NXR4 508 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 IFNEQ86WN2 208 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 RNF217Q8TC41 542 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 GIMAP4Q9NUV9 329 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 WDR70Q9NW82 654 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 PCDHB2Q9Y5E7 798 aa18.89■□□□□ 0.61
CHRNA4-201ENST00000370263 CNTNAP5Q8WYK1 1306 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 VCAM1P19320 739 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 TRMT5Q32P41 509 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 ATXN2LQ8WWM7 1075 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 GABBR1Q9UBS5 961 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 TBX3O15119 743 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 HNRNPRO43390 633 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 FXR2P51116 673 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 AASDHQ4L235 1098 aaPredicted RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 SEPT8Q92599 483 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 CNDP1Q96KN2 507 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 CATSPER2Q96P56 530 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 FRMD8Q9BZ67 464 aaPredicted RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 IQGAP3Q86VI3 1631 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 SLC34A1Q06495 639 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 SNX30Q5VWJ9 437 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 LMBRD2Q68DH5 695 aaPredicted RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 KCND2Q9NZV8 630 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 ARHGAP20Q9P2F6 1191 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 A0A0G2JLW4 131 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 CLK1P49759 484 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 DMC1Q14565 340 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 USP10Q14694 798 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 DSTYKQ6XUX3 929 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 EEPD1Q7L9B9 569 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 PACSIN1Q9BY11 444 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 MRPL4Q9BYD3 311 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 TAGLN3Q9UI15 199 aa18.88■□□□□ 0.61
CHRNA4-201ENST00000370263 ELF3P78545 371 aaPredicted RBP18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 RBBP7Q16576 425 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 MIGA2Q7L4E1 593 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 JADE3Q92613 823 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 INPP5DQ92835 1189 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 ZNF512BQ96KM6 892 aaPredicted RBP18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 SH3GL2Q99962 352 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 MAD2L2Q9UI95 211 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 ZNF844Q08AG5 666 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 ETAA1Q9NY74 926 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 GJB7Q6PEY0 223 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 IQSEC2Q5JU85 1478 aa18.87■□□□□ 0.61
CHRNA4-201ENST00000370263 TRAPPC3O43617 180 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms