RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 TRIP10Q15642 601 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 PDCD2Q16342 344 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 KCNT1Q5JUK3 1230 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 CEP120Q8N960 986 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 WDR60Q8WVS4 1066 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 GORASP1Q9BQQ3 440 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 SLC17A7Q9P2U7 560 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 PDE5AO76074 875 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 GCLCP48506 637 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 SOX10P56693 466 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 CCDC33Q8N5R6 958 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 LRRN4Q8WUT4 740 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 LXNQ9BS40 222 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 APOL6Q9BWW8 343 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 ARAP2Q8WZ64 1704 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 PSMG1O95456 288 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 CYP11B1P15538 503 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 AMPD1P23109 780 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 DBN1Q16643 649 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 MMEL1Q495T6 779 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 FAXCQ5TGI0 409 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 RNF43Q68DV7 783 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 C11orf63Q6NUN7 778 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 PRPF39Q86UA1 669 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 RSPH3Q86UC2 560 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 PRR11Q96HE9 360 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 NACC1Q96RE7 527 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 NDNQ99608 321 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 FAM213AQ9BRX8 229 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 BTBD10Q9BSF8 475 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 CADM1Q9BY67 442 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 DNPEPQ9ULA0 475 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 MYH3P11055 1940 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 CHD4Q14839 1912 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 DISP2A7MBM2 1401 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
PRPF38B-201ENST00000370021 SPECC1L-ADORA2AF8WAN1 911 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 HNRNPRO43390 633 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 RTN3O95197 1032 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ZWINTO95229 277 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 FESP07332 822 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 PHBP35232 272 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 HIF1AQ16665 826 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 IYDQ6PHW0 289 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ARHGAP27Q6ZUM4 889 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ALYREFQ86V81 257 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 BBOF1Q8ND07 529 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ASAP3Q8TDY4 903 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 TAS1R2Q8TE23 839 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 HSPBP1Q9NZL4 362 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 WHRNQ9P202 907 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 BTNL10A8MVZ5 291 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 F5H6K3 240 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 PIK3R2O00459 728 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 DRG2P55039 364 aaKnown RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 NR1H3Q13133 447 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 MED21Q13503 144 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SPOPLQ6IQ16 392 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 C4orf50Q6ZRC1 276 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 CLNKQ7Z7G1 428 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 GALNT4Q8N4A0 578 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 GLIS1Q8NBF1 620 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 LRMDAQ9H2I8 198 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 COPEO14579 308 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SAT1P21673 171 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 AP2B1P63010 937 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 ACAP1Q15027 740 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 RASA2Q15283 850 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 CYTH1Q15438 398 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 MAPK6Q16659 721 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 BRDTQ58F21 947 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SCYL2Q6P3W7 929 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 RIBC1Q8N443 379 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 TTC16Q8NEE8 873 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 MECRQ9BV79 373 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 PCDHA3Q9Y5H8 950 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 DOCK2Q92608 1830 aa10.98□□□□□ -0.65
PRPF38B-201ENST00000370021 A6NJR5 290 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 FCHO1O14526 889 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 SLC16A3O15427 465 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 GGPS1O95749 300 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 DYNC1I2Q13409 638 aaKnown RBP10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 EML3Q32P44 896 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 GALNTL6Q49A17 601 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 SEZ6Q53EL9 994 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 CGB2Q6NT52 195 aa10.97□□□□□ -0.65
PRPF38B-201ENST00000370021 IRGCQ6NXR0 463 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms