RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SNX25Q9H3E2 840 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 TRABDQ9H4I3 376 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 AFF2P51816 1311 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 A0A087X0T9 212 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 C5orf60A6NFR6 353 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 MED24O75448 989 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 FAM163BP0C2L3 166 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 FAM228BP0C875 321 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CYP2C9P11712 490 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CDC25AP30304 524 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 YWHAGP61981 247 aaKnown RBP eCLIP7.69□□□□□ -1.18
VTA1-202ENST00000367630 COG2Q14746 738 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 PARP6Q2NL67 630 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 SPDYE2Q495Y8 402 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 HIBCHQ6NVY1 386 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 ZNF571Q7Z3V5 609 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 SESTD1Q86VW0 696 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 OSBPL8Q9BZF1 889 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 TRIM6Q9C030 488 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 LGALS13Q9UHV8 139 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 SLC12A6Q9UHW9 1150 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 DERAQ9Y315 318 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 COL1A2P08123 1366 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 NHSQ6T4R5 1651 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 MAGEB16A2A368 324 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CXCR5P32302 372 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KCNQ4P56696 695 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 TAF11Q15544 211 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 C16orf89Q6UX73 402 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CCT6BQ92526 530 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 TNIP3Q96KP6 325 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KCNK16Q96T55 309 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KIFC3Q9BVG8 833 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 EML4Q9HC35 981 aaKnown RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 ARHGAP10A1A4S6 786 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 DDX39AO00148 427 aaKnown RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 GIPC1O14908 333 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 PLSCR1O15162 318 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 PSMD10O75832 226 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KRT10P13645 584 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 COMTP21964 271 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 DNAJB1P25685 340 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 AXLP30530 894 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 ITGB3BPQ13352 177 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 EMC2Q15006 297 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 DALRD3Q5D0E6 543 aaKnown RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 ACAD11Q709F0 780 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CCDC117Q8IWD4 279 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 ACMSDQ8TDX5 336 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KLRG2A4D1S0 409 aaPredicted RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 TCP10L2B9ZVM9 353 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 NCK2O43639 380 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 ATP2C2O75185 946 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 KRT3P12035 628 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 GRK2P25098 689 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 NFKBIAP25963 317 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 RNASE9P60153 205 aaKnown RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 DOK7Q18PE1 504 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CAPRIN2Q6IMN6 1127 aaKnown RBP7.69□□□□□ -1.18
VTA1-202ENST00000367630 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 FAM71AQ8IYT1 594 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 CCDC127Q96BQ5 260 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 SPC25Q9HBM1 224 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
VTA1-202ENST00000367630 HBP1O60381 514 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 FBXO21O94952 628 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 OATP04181 439 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 SDC4P31431 198 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 CAP2P40123 477 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 CARSP49589 748 aaKnown RBP7.68□□□□□ -1.18
VTA1-202ENST00000367630 CDK7P50613 346 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 STX1BP61266 288 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 LINC00523Q86TU6 105 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 TTC1Q99614 292 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 UNC45AQ9H3U1 944 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 QTRT2Q9H974 415 aaKnown RBP7.68□□□□□ -1.18
VTA1-202ENST00000367630 AMACRQ9UHK6 382 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 ADAM28Q9UKQ2 775 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 JAG2Q9Y219 1238 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 AP3M1Q9Y2T2 418 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 UBIAD1Q9Y5Z9 338 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.68□□□□□ -1.18
VTA1-202ENST00000367630 LRRN2O75325 713 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 CLTAP09496 248 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 VDRP11473 427 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 MAGEA4P43358 317 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 GCLMP48507 274 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 TGFB2P61812 414 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 DUPD1Q68J44 220 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 IQCKQ8N0W5 287 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 TATDN2Q93075 761 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 FAM192AQ9GZU8 254 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 ANKRD6Q9Y2G4 727 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 NRAPQ86VF7 1730 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
VTA1-202ENST00000367630 SNRPAP09012 282 aaKnown RBP7.68□□□□□ -1.18
VTA1-202ENST00000367630 GYS1P13807 737 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms