RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
SHPRH-202ENST00000367503 CDC42EP4Q9H3Q1 356 aaKnown RBP12.88□□□□□ -0.35
SHPRH-202ENST00000367503 COMTP21964 271 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 LENG1Q96BZ8 264 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 GCOM2Q9BZD3 368 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TYK2P29597 1187 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF200P98182 395 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 PLOD1Q02809 727 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 MTMR1Q13613 665 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 LRRC8BQ6P9F7 803 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 C20orf96Q9NUD7 363 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 AKT3Q9Y243 479 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 UNC5CO95185 931 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 PSMG1O95456 288 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 OATP04181 439 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 MYL2P10916 166 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 SFNP31947 248 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 MAP3K7CLP57077 242 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 ZBTB41Q5SVQ8 909 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 MARK2Q7KZI7 788 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 SLC16A4O15374 487 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 DLGAP3O95886 979 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 VCPP55072 806 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 BLMHQ13867 455 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 RASA2Q15283 850 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 TSHZ1Q6ZSZ6 1077 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 CCDC103Q8IW40 242 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
SHPRH-202ENST00000367503 SEMA4AQ9H3S1 761 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
SHPRH-202ENST00000367503 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 MYMKA6NI61 221 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 MMP14P50281 582 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 EPHA7Q15375 998 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TLR10Q9BXR5 811 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 ATAD3AQ9NVI7 634 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 E9PCH4 1651 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 DENND3A2RUS2 1198 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 PIK3R2O00459 728 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SNAP25P60880 206 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 CHI3L2Q15782 390 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 GSTA3Q16772 222 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 NCLNQ969V3 563 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 GALNT8Q9NY28 637 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TMCO1Q9UM00 188 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 F5H6K3 240 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 KPNA4O00629 521 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 CBX6O95503 412 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 CHEK2O96017 543 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 NPR1P16066 1061 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 KLRC3Q07444 240 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 PASD1Q8IV76 773 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 NAGPAQ9UK23 515 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SLC9A1P19634 815 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 STAT3P40763 770 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 C21orf59P57076 290 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 C3orf62Q6ZUJ4 267 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 ARMCX2Q7L311 632 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-202ENST00000367503 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 WHRNQ9P202 907 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
SHPRH-202ENST00000367503 ABCB11O95342 1321 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms