RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PAPOLAP51003 745 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 MCL1Q07820 350 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 MXD4Q14582 209 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 CASC4Q6P4E1 433 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 IRF2BP2Q7Z5L9 587 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 KCTD6Q8NC69 237 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 RBM46Q8TBY0 533 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 TRIM15Q9C019 465 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SPAG6O75602 509 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 PSMD10O75832 226 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 CCNA1P78396 465 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 NFIAQ12857 509 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 EZH2Q15910 746 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SGSM1Q2NKQ1 1148 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 DACT2Q5SW24 774 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 GJB7Q6PEY0 223 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 ATP11CQ8NB49 1132 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 POLR3FQ9H1D9 316 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 AGO4Q9HCK5 861 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 MEIS2O14770 477 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 PDE5AO76074 875 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 BLVRAP53004 296 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 C1orf146Q5VVC0 180 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SCYL2Q6P3W7 929 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 TMEM270Q6UE05 265 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SPATA21Q7Z572 469 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 ETNPPLQ8TBG4 499 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 CCDC124Q96CT7 223 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 RPAP3Q9H6T3 665 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 RMI1Q9H9A7 625 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 DDX4Q9NQI0 724 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 KRT82Q9NSB4 513 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 SMARCAL1Q9NZC9 954 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 PCDHA3Q9Y5H8 950 aa5.65□□□□□ -1.5
CDC42BPA-204ENST00000366767 RCCD1A6NED2 376 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLCO1A2P46721 670 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 DMPKQ09013 629 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 MFSD4BQ5TF39 518 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 CHST13Q8NET6 341 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 FEZF2Q8TBJ5 459 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 C11orf70Q9BRQ4 267 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIM51Q9BSJ1 452 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 PACSIN1Q9BY11 444 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 C10orf88Q9H8K7 445 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 INO80B-WBP1J3KQ70 363 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 RNF225M0QZC1 329 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 DEAF1O75398 565 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACSL3O95573 720 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 PYGBP11216 843 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 CA4P22748 312 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 PSMA2P25787 234 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 NOVP48745 357 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 HADHBP55084 474 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 CCNG2Q16589 344 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 DARS2Q6PI48 645 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 PAWRQ96IZ0 340 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 INO80BQ9C086 356 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 USP15Q9Y4E8 981 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYH11P35749 1972 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM86B1E9PN63 330 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 PRPSAP2O60256 369 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 KRT37O76014 449 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 NR3C2P08235 984 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM86B2P0C5J1 330 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 GCNT1Q02742 428 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 MRPL28Q13084 256 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC29A2Q14542 456 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYP4F22Q6NT55 531 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF384Q8TF68 577 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 LZICQ8WZA0 190 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 INPP4AQ96PE3 977 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIM55Q9BYV6 548 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 UBXN6Q9BZV1 441 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 KLC2Q9H0B6 622 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 A0A0U1RQJ8 604 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 CCT8L1PA6NM43 557 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 SMIM22K7EJ46 135 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 ADCY3O60266 1144 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 LYPLA2O95372 231 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 NAMPTP43490 491 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 SERPINB4P48594 390 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 RARRES1P49788 294 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 DALRD3Q5D0E6 543 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 HES6Q96HZ4 224 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 OSBPL8Q9BZF1 889 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 DIABLOQ9NR28 239 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 WARS2Q9UGM6 360 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 BAG5Q9UL15 447 aa5.65□□□□□ -1.51
CDC42BPA-204ENST00000366767 APOA1P02647 267 aa5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARP10275 920 aa5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 GNAT1P11488 350 aa5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM47CQ5HY64 1035 aa5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 SNRNP48Q6IEG0 339 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 DCPSQ96C86 337 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 THAP11Q96EK4 314 aa5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 PRMT6Q96LA8 375 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 CELF4Q9BZC1 486 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-204ENST00000366767 ASCC2Q9H1I8 757 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms