RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
CAPN9-203ENST00000366666 FBXL5Q9UKA1 691 aa13.12□□□□□ -0.31
CAPN9-203ENST00000366666 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
CAPN9-203ENST00000366666 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
CAPN9-203ENST00000366666 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CAPN9-203ENST00000366666 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-203ENST00000366666 FAM170AA1A519 330 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 FANCGO15287 622 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 GFPT2O94808 682 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 POMCP01189 267 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 CXCL10P02778 98 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 KCNE1P15382 129 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 CSF2RAP15509 400 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 FECHP22830 423 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 AP3M2P53677 418 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 GNG11P61952 73 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 TRPC3Q13507 836 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 MEA1Q16626 185 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 COL13A1Q5TAT6 717 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-203ENST00000366666 SLC24A5Q71RS6 500 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 IRF2BP2Q7Z5L9 587 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 CD302Q8IX05 232 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 STK33Q9BYT3 514 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 B4GALT3O60512 393 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
CAPN9-203ENST00000366666 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 GATMP50440 423 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 TUBB4BP68371 445 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-203ENST00000366666 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
CAPN9-203ENST00000366666 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
CAPN9-203ENST00000366666 A0A0U1RQJ8 604 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TIMP1P01033 207 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 WEE2P0C1S8 567 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 RAB27AP51159 221 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 FAM189BP81408 668 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ZNF699Q32M78 642 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 WDR72Q3MJ13 1102 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ATRIPQ8WXE1 791 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SEPT8Q92599 483 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 DESI2Q9BSY9 194 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 DERAQ9Y315 318 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
CAPN9-203ENST00000366666 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SPTLC1O15269 473 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 EVI5O60447 810 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ACRP10323 421 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SOX5P35711 763 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 USP8P40818 1118 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ASPAP45381 313 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 CDH8P55286 799 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 CUL2Q13617 745 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 OLIG1Q8TAK6 271 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SHC3Q92529 594 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 FTHL17Q9BXU8 183 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ITGA11Q9UKX5 1188 aa13.1□□□□□ -0.31
CAPN9-203ENST00000366666 UBQLN1Q9UMX0 589 aaKnown RBP13.1□□□□□ -0.31
CAPN9-203ENST00000366666 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 F8W810 466 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
CAPN9-203ENST00000366666 RAG1P15918 1043 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
CAPN9-203ENST00000366666 GCNT1Q02742 428 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 GPS2Q13227 327 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 WDR24Q96S15 920 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 RPS6KC1Q96S38 1066 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 HAUS4Q9H6D7 363 aa13.09□□□□□ -0.31
CAPN9-203ENST00000366666 NHEJ1Q9H9Q4 299 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-203ENST00000366666 ERICH4A6NGS2 130 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms