RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PAMP19021 973 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ARHGAP25P42331 645 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 SLC12A3P55017 1021 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ZNF280AP59817 542 aaPredicted RBP14.63□□□□□ -0.07
CTR9-201ENST00000361367 EIF3EP60228 445 aaKnown RBP14.63□□□□□ -0.07
CTR9-201ENST00000361367 KRT17Q04695 432 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 MAP2K5Q13163 448 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 NNTQ13423 1086 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 E2F4Q16254 413 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 EFHC1Q5JVL4 640 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ZPBP2Q6X784 338 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
CTR9-201ENST00000361367 FUCA2Q9BTY2 467 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.63□□□□□ -0.07
CTR9-201ENST00000361367 BFARQ9NZS9 450 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 NAGPAQ9UK23 515 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ANGPTL3Q9Y5C1 460 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 A0A087X0T9 212 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 PPP1R12AO14974 1030 aaPredicted RBP14.63□□□□□ -0.07
CTR9-201ENST00000361367 KRT37O76014 449 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 FAM228BP0C875 321 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 GHRP10912 638 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 FGFR4P22455 802 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 PPARGP37231 505 aaPredicted RBP14.63□□□□□ -0.07
CTR9-201ENST00000361367 MYL6P60660 151 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 FIGNQ5HY92 759 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ACOT1Q86TX2 421 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ATP6V1E2Q96A05 226 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 RNF208Q9H0X6 261 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 GTF3C4Q9UKN8 822 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 USP20Q9Y2K6 914 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 ALG6Q9Y672 507 aa14.63□□□□□ -0.07
CTR9-201ENST00000361367 USP2O75604 605 aaPredicted RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 MCF2P10911 925 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 COMTP21964 271 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 CA4P22748 312 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 ORC1Q13415 861 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 SLITRK1Q96PX8 696 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 DDX50Q9BQ39 737 aaKnown RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 AAASQ9NRG9 546 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 CHORDC1Q9UHD1 332 aaPredicted RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 IQANK1A0A1B0GTG1 560 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 PQBP1O60828 265 aaKnown RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 HOXC6P09630 235 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 CDR2Q01850 454 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 ADCY2Q08462 1091 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 SNX17Q15036 470 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 ACCSLQ4AC99 568 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 NT5DC1Q5TFE4 455 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 DFFAO00273 331 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 CYB561D2O14569 222 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 GPC4O75487 556 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 ZKSCAN8Q15776 578 aaPredicted RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 SPOPLQ6IQ16 392 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 LSM7Q9UK45 103 aaKnown RBP14.62□□□□□ -0.07
CTR9-201ENST00000361367 FAN1Q9Y2M0 1017 aa14.62□□□□□ -0.07
CTR9-201ENST00000361367 FOXP2O15409 715 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ATP9AO75110 1047 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 SGPL1O95470 568 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ZNF235Q14590 738 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 NCAPHQ15003 741 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 CYP4A22Q5TCH4 519 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 TRIM42Q8IWZ5 723 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 SLC7A14Q8TBB6 771 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 FEZF2Q8TBJ5 459 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ZNF384Q8TF68 577 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.61□□□□□ -0.07
CTR9-201ENST00000361367 SNTG2Q9NY99 539 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 KIAA1257Q9ULG3 409 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 DHX34Q14147 1143 aaKnown RBP14.61□□□□□ -0.07
CTR9-201ENST00000361367 SLC27A1Q6PCB7 646 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 CXCL17Q6UXB2 119 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 C1orf186Q6ZWK4 172 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 NEMP1O14524 444 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ZNF185O15231 689 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ACO1P21399 889 aaKnown RBP14.61□□□□□ -0.07
CTR9-201ENST00000361367 PTGER2P43116 358 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ACAD10Q6JQN1 1059 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ZNF410Q86VK4 478 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 UPF1Q92900 1129 aaKnown RBP eCLIP14.61□□□□□ -0.07
CTR9-201ENST00000361367 KLRG2A4D1S0 409 aaPredicted RBP14.61□□□□□ -0.07
CTR9-201ENST00000361367 VDRP11473 427 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 GPD1P21695 349 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ALDH1A3P47895 512 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 RASSF2P50749 326 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ARSEP51690 589 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 RAD51Q06609 339 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 ASPHQ12797 758 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 DEFB128Q7Z7B8 93 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 PPFIBP2Q8ND30 876 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 DNAJC7Q99615 494 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 PLAAQ9Y263 795 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 TOPAZ1Q8N9V7 1692 aa14.61□□□□□ -0.07
CTR9-201ENST00000361367 GTPBP10A4D1E9 387 aaKnown RBP14.6□□□□□ -0.07
CTR9-201ENST00000361367 AP1G2O75843 785 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms