RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MOXD2PA6NHM9 499 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 PALMO75781 387 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 CXCL8P10145 99 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 AXLP30530 894 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 MRPS6P82932 125 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 POU5F1Q01860 360 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 PAK2Q13177 524 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 DCAF4L1Q3SXM0 396 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 ZACNQ401N2 412 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 WDR44Q5JSH3 913 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 TDRD10Q5VZ19 366 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 ARHGEF19Q8IW93 802 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 ARRDC4Q8NCT1 418 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 TAF4BQ92750 862 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 FAM81BQ96LP2 452 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 DEFB118Q96PH6 123 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 SH3GL2Q99962 352 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 CXCL16Q9H2A7 254 aa14.09□□□□□ -0.15
SQSTM1-201ENST00000360718 BTNL10A8MVZ5 291 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 CES2O00748 559 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.152e-14■■■■□ 19.8
SQSTM1-201ENST00000360718 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 FERP16591 822 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 PIK3CAP42336 1068 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 JAM2P57087 298 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 DRAP1Q14919 205 aaPredicted RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 DNAJC21Q5F1R6 531 aaKnown RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 MEI1Q5TIA1 1274 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 C10orf67Q8IYJ2 551 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 EIF2AQ9BY44 585 aaKnown RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 RBM12Q9NTZ6 932 aaKnown RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 NOD1Q9Y239 953 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 NOC2LQ9Y3T9 749 aaKnown RBP14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 PCDHGC5Q9Y5F6 944 aa14.08□□□□□ -0.15
SQSTM1-201ENST00000360718 PDCD11Q14690 1871 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 VNN1O95497 513 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 STAG3L1P0CL83 205 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 MFAP3P55082 362 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 MGAT3Q09327 533 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 ARHGAP44Q17R89 818 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 DUOXA2Q1HG44 320 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 SLC27A1Q6PCB7 646 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 FAM228AQ86W67 206 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 EFCAB13Q8IY85 973 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 PPM1KQ8N3J5 372 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 KAT5Q92993 513 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 PI4K2AQ9BTU6 479 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 GPR88Q9GZN0 384 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 GDF3Q9NR23 364 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 C1orf112Q9NSG2 853 aa14.08□□□□□ -0.16
SQSTM1-201ENST00000360718 F8VZ95 297 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 NPTXRO95502 500 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TNNC2P02585 160 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TMEM191BP0C7N4 346 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 CCL5P13501 91 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 ANXA13P27216 316 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 SOX5P35711 763 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TNNC1P63316 161 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 PTPN11Q06124 597 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TRIM71Q2Q1W2 868 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 ACAP3Q96P50 834 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 CAPS2Q9BXY5 557 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 IMPG2Q9BZV3 1241 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TRIM6Q9C030 488 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 SENP6Q9GZR1 1112 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 LCMT1Q9UIC8 334 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 PHF24Q9UPV7 400 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 TRPV2Q9Y5S1 764 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 B4GALT4O60513 344 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 THPOP40225 353 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 SLC43A3Q8NBI5 491 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 HINFPQ9BQA5 517 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 RNF208Q9H0X6 261 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 STARD7Q9NQZ5 370 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 SMARCAL1Q9NZC9 954 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 ADAMTS1Q9UHI8 967 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 HES2Q9Y543 173 aa14.07□□□□□ -0.16
SQSTM1-201ENST00000360718 A0A087X0T9 212 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 KBTBD13C9JR72 458 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 GFPT2O94808 682 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 FAM228BP0C875 321 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 PRKCIP41743 596 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 IRAK1P51617 712 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 TFAMQ00059 246 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 SLC10A6Q3KNW5 377 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 FOXR1Q6PIV2 292 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 ENOSF1Q7L5Y1 443 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 IRF2BP2Q7Z5L9 587 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 PBKQ96KB5 322 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms